Viewing data for Falco sparverius


Scientific name Falco sparverius
Common name American kestrel
Maximum lifespan 17.00 years (Falco sparverius@AnAge)

Total mtDNA (size: 17507 bases) GC AT G C A T
Base content (bases) 7967 9538 5611 2356 3991 5547
Base content per 1 kb (bases) 455 545 321 135 228 317
Base content (%) 45.5% 54.5%
Total protein-coding genes (size: 11379 bases) GC AT G C A T
Base content (bases) 5250 6127 3884 1366 2635 3492
Base content per 1 kb (bases) 461 538 341 120 232 307
Base content (%) 46.1% 53.8%
D-loop: No data available for this section.
Total tRNA-coding genes (size: 1563 bases) GC AT G C A T
Base content (bases) 673 890 406 267 376 514
Base content per 1 kb (bases) 431 569 260 171 241 329
Base content (%) 43.1% 56.9%
Total rRNA-coding genes (size: 2582 bases) GC AT G C A T
Base content (bases) 1215 1367 735 480 490 877
Base content per 1 kb (bases) 471 529 285 186 190 340
Base content (%) 47.1% 52.9%
12S rRNA gene (size: 983 bases) GC AT G C A T
Base content (bases) 491 492 296 195 173 319
Base content per 1 kb (bases) 499 501 301 198 176 325
Base content (%) 49.9% 50.1%
16S rRNA gene (size: 1599 bases) GC AT G C A T
Base content (bases) 724 875 439 285 317 558
Base content per 1 kb (bases) 453 547 275 178 198 349
Base content (%) 45.3% 54.7%

ATP6 (size: 684 bases) GC AT G C A T
Base content (bases) 322 362 257 65 159 203
Base content per 1 kb (bases) 471 529 376 95 232 297
Base content (%) 47.1% 52.9%
ATP8 (size: 168 bases) GC AT G C A T
Base content (bases) 67 101 58 9 41 60
Base content per 1 kb (bases) 399 601 345 54 244 357
Base content (%) 39.9% 60.1%
COX1 (size: 1551 bases) GC AT G C A T
Base content (bases) 750 801 504 246 374 427
Base content per 1 kb (bases) 484 516 325 159 241 275
Base content (%) 48.4% 51.6%
COX2 (size: 684 bases) GC AT G C A T
Base content (bases) 315 368 218 97 156 212
Base content per 1 kb (bases) 461 538 319 142 228 310
Base content (%) 46.1% 53.8%
COX3 (size: 784 bases) GC AT G C A T
Base content (bases) 368 416 248 120 193 223
Base content per 1 kb (bases) 469 531 316 153 246 284
Base content (%) 46.9% 53.1%
CYTB (size: 1143 bases) GC AT G C A T
Base content (bases) 529 614 387 142 278 336
Base content per 1 kb (bases) 463 537 339 124 243 294
Base content (%) 46.3% 53.7%
ND1 (size: 975 bases) GC AT G C A T
Base content (bases) 458 517 332 126 250 267
Base content per 1 kb (bases) 470 530 341 129 256 274
Base content (%) 47.0% 53.0%
ND2 (size: 1041 bases) GC AT G C A T
Base content (bases) 456 585 357 99 247 338
Base content per 1 kb (bases) 438 562 343 95 237 325
Base content (%) 43.8% 56.2%
ND3 (size: 352 bases) GC AT G C A T
Base content (bases) 149 202 110 39 97 105
Base content per 1 kb (bases) 423 574 313 111 276 298
Base content (%) 42.3% 57.4%
ND4 (size: 1378 bases) GC AT G C A T
Base content (bases) 636 742 497 139 316 426
Base content per 1 kb (bases) 462 538 361 101 229 309
Base content (%) 46.2% 53.8%
ND4L (size: 297 bases) GC AT G C A T
Base content (bases) 140 157 103 37 77 80
Base content per 1 kb (bases) 471 529 347 125 259 269
Base content (%) 47.1% 52.9%
ND5 (size: 1818 bases) GC AT G C A T
Base content (bases) 821 997 619 202 396 601
Base content per 1 kb (bases) 452 548 340 111 218 331
Base content (%) 45.2% 54.8%
ND6 (size: 522 bases) GC AT G C A T
Base content (bases) 243 279 196 47 56 223
Base content per 1 kb (bases) 466 534 375 90 107 427
Base content (%) 46.6% 53.4%

ATP6 (size: 684 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 8 (3.52%)
Alanine (Ala, A)
n = 16 (7.05%)
Serine (Ser, S)
n = 13 (5.73%)
Threonine (Thr, T)
n = 24 (10.57%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 8 (3.52%)
Leucine (Leu, L)
n = 59 (25.99%)
Isoleucine (Ile, I)
n = 17 (7.49%)
Methionine (Met, M)
n = 12 (5.29%)
Proline (Pro, P)
n = 17 (7.49%)
Phenylalanine (Phe, F)
n = 9 (3.96%)
Tyrosine (Tyr, Y)
n = 4 (1.76%)
Tryptophan (Trp, W)
n = 4 (1.76%)
Aspartic acid (Asp, D)
n = 2 (0.88%)
Glutamic acid (Glu, E)
n = 4 (1.76%)
Asparagine (Asn, N)
n = 9 (3.96%)
Glutamine (Gln, Q)
n = 8 (3.52%)
Histidine (His, H)
n = 4 (1.76%)
Lysine (Lys, K)
n = 4 (1.76%)
Arginine (Arg, R)
n = 5 (2.2%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
7 10 9 7 16 31 1 4 8 0 1 5 2 0 2 7
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
3 0 0 1 8 7 0 0 4 4 0 1 11 5 0 2
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
11 10 1 1 6 2 0 0 4 0 4 1 0 0 9 1
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
3 4 0 0 2 4 0 0 2 3 0 0 0 1 0 3
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
38 89 70 31
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
21 66 36 105
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
6 102 97 23
ATP8 (size: 168 bases)
Amino acid sequence: MPQLNPNPWFLTMLVTWTIFLLIIQPKLLPFTSTNNPQNKANTLNKSTPWTWPWT*
Amino acid frequencies:
Glycine (Gly, G)
n = 0 (0%)
Alanine (Ala, A)
n = 1 (1.82%)
Serine (Ser, S)
n = 2 (3.64%)
Threonine (Thr, T)
n = 9 (16.36%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 1 (1.82%)
Leucine (Leu, L)
n = 8 (14.55%)
Isoleucine (Ile, I)
n = 3 (5.45%)
Methionine (Met, M)
n = 2 (3.64%)
Proline (Pro, P)
n = 8 (14.55%)
Phenylalanine (Phe, F)
n = 3 (5.45%)
Tyrosine (Tyr, Y)
n = 0 (0%)
Tryptophan (Trp, W)
n = 5 (9.09%)
Aspartic acid (Asp, D)
n = 0 (0%)
Glutamic acid (Glu, E)
n = 0 (0%)
Asparagine (Asn, N)
n = 7 (12.73%)
Glutamine (Gln, Q)
n = 3 (5.45%)
Histidine (His, H)
n = 0 (0%)
Lysine (Lys, K)
n = 3 (5.45%)
Arginine (Arg, R)
n = 0 (0%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
2 1 1 3 0 2 1 2 3 0 0 1 0 0 0 3
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
1 0 0 0 1 0 0 0 0 0 0 2 2 4 0 1
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
7 1 0 1 1 0 0 0 0 0 0 0 0 2 5 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
0 0 0 0 0 3 0 0 0 0 0 0 0 1 0 5
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
2 17 24 13
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
5 20 14 17
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
2 21 22 11
COX1 (size: 1551 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 47 (9.11%)
Alanine (Ala, A)
n = 46 (8.91%)
Serine (Ser, S)
n = 26 (5.04%)
Threonine (Thr, T)
n = 43 (8.33%)
Cysteine (Cys, C)
n = 1 (0.19%)
Valine (Val, V)
n = 32 (6.2%)
Leucine (Leu, L)
n = 66 (12.79%)
Isoleucine (Ile, I)
n = 41 (7.95%)
Methionine (Met, M)
n = 23 (4.46%)
Proline (Pro, P)
n = 30 (5.81%)
Phenylalanine (Phe, F)
n = 42 (8.14%)
Tyrosine (Tyr, Y)
n = 19 (3.68%)
Tryptophan (Trp, W)
n = 17 (3.29%)
Aspartic acid (Asp, D)
n = 15 (2.91%)
Glutamic acid (Glu, E)
n = 10 (1.94%)
Asparagine (Asn, N)
n = 15 (2.91%)
Glutamine (Gln, Q)
n = 8 (1.55%)
Histidine (His, H)
n = 18 (3.49%)
Lysine (Lys, K)
n = 9 (1.74%)
Arginine (Arg, R)
n = 8 (1.55%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
10 31 22 5 18 35 4 4 7 1 6 8 16 2 10 32
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
1 0 1 8 22 15 1 4 17 22 4 1 13 16 0 7
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
22 13 1 2 11 10 0 0 3 6 13 2 0 1 14 2
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
16 8 2 2 13 9 0 0 2 6 0 0 1 0 0 15
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
150 126 135 106
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
77 142 94 204
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
19 236 198 64
COX2 (size: 684 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 8 (3.52%)
Alanine (Ala, A)
n = 16 (7.05%)
Serine (Ser, S)
n = 19 (8.37%)
Threonine (Thr, T)
n = 15 (6.61%)
Cysteine (Cys, C)
n = 3 (1.32%)
Valine (Val, V)
n = 14 (6.17%)
Leucine (Leu, L)
n = 31 (13.66%)
Isoleucine (Ile, I)
n = 20 (8.81%)
Methionine (Met, M)
n = 9 (3.96%)
Proline (Pro, P)
n = 13 (5.73%)
Phenylalanine (Phe, F)
n = 8 (3.52%)
Tyrosine (Tyr, Y)
n = 8 (3.52%)
Tryptophan (Trp, W)
n = 5 (2.2%)
Aspartic acid (Asp, D)
n = 13 (5.73%)
Glutamic acid (Glu, E)
n = 14 (6.17%)
Asparagine (Asn, N)
n = 5 (2.2%)
Glutamine (Gln, Q)
n = 8 (3.52%)
Histidine (His, H)
n = 9 (3.96%)
Lysine (Lys, K)
n = 4 (1.76%)
Arginine (Arg, R)
n = 5 (2.2%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
5 15 6 4 8 16 1 2 7 1 0 3 8 2 1 7
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
3 0 3 2 9 5 0 0 1 6 1 1 6 6 0 4
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
4 7 0 2 9 6 0 0 2 3 5 0 0 2 3 2
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
7 14 0 4 9 3 1 0 2 3 0 0 0 1 0 5
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
64 64 55 44
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
23 61 62 81
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
9 93 95 30
COX3 (size: 784 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 20 (7.69%)
Alanine (Ala, A)
n = 22 (8.46%)
Serine (Ser, S)
n = 18 (6.92%)
Threonine (Thr, T)
n = 18 (6.92%)
Cysteine (Cys, C)
n = 1 (0.38%)
Valine (Val, V)
n = 11 (4.23%)
Leucine (Leu, L)
n = 32 (12.31%)
Isoleucine (Ile, I)
n = 20 (7.69%)
Methionine (Met, M)
n = 11 (4.23%)
Proline (Pro, P)
n = 14 (5.38%)
Phenylalanine (Phe, F)
n = 23 (8.85%)
Tyrosine (Tyr, Y)
n = 9 (3.46%)
Tryptophan (Trp, W)
n = 12 (4.62%)
Aspartic acid (Asp, D)
n = 5 (1.92%)
Glutamic acid (Glu, E)
n = 8 (3.08%)
Asparagine (Asn, N)
n = 4 (1.54%)
Glutamine (Gln, Q)
n = 9 (3.46%)
Histidine (His, H)
n = 15 (5.77%)
Lysine (Lys, K)
n = 4 (1.54%)
Arginine (Arg, R)
n = 5 (1.92%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
6 14 10 1 10 16 2 2 7 2 1 2 7 1 5 18
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
1 0 1 9 8 5 0 0 6 12 2 1 8 5 0 4
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
4 10 0 1 5 7 0 1 4 3 6 1 1 0 4 1
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
14 7 1 1 4 4 0 0 1 4 0 0 0 0 0 11
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
66 72 62 61
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
43 67 54 97
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
11 109 107 34
CYTB (size: 1143 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 25 (6.58%)
Alanine (Ala, A)
n = 25 (6.58%)
Serine (Ser, S)
n = 24 (6.32%)
Threonine (Thr, T)
n = 28 (7.37%)
Cysteine (Cys, C)
n = 4 (1.05%)
Valine (Val, V)
n = 14 (3.68%)
Leucine (Leu, L)
n = 69 (18.16%)
Isoleucine (Ile, I)
n = 30 (7.89%)
Methionine (Met, M)
n = 12 (3.16%)
Proline (Pro, P)
n = 26 (6.84%)
Phenylalanine (Phe, F)
n = 25 (6.58%)
Tyrosine (Tyr, Y)
n = 15 (3.95%)
Tryptophan (Trp, W)
n = 11 (2.89%)
Aspartic acid (Asp, D)
n = 6 (1.58%)
Glutamic acid (Glu, E)
n = 7 (1.84%)
Asparagine (Asn, N)
n = 21 (5.53%)
Glutamine (Gln, Q)
n = 8 (2.11%)
Histidine (His, H)
n = 12 (3.16%)
Lysine (Lys, K)
n = 10 (2.63%)
Arginine (Arg, R)
n = 8 (2.11%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
9 21 10 3 16 35 3 11 7 1 3 6 3 2 4 21
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 2 2 2 16 6 1 2 6 16 1 2 11 12 1 1
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
15 12 0 3 7 12 0 0 2 3 12 3 1 0 21 3
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
9 7 0 0 6 10 0 1 4 3 0 0 0 1 0 8
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
77 111 103 90
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
50 101 80 150
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
15 175 153 38
ND1 (size: 975 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 14 (4.32%)
Alanine (Ala, A)
n = 33 (10.19%)
Serine (Ser, S)
n = 27 (8.33%)
Threonine (Thr, T)
n = 23 (7.1%)
Cysteine (Cys, C)
n = 2 (0.62%)
Valine (Val, V)
n = 13 (4.01%)
Leucine (Leu, L)
n = 63 (19.44%)
Isoleucine (Ile, I)
n = 21 (6.48%)
Methionine (Met, M)
n = 13 (4.01%)
Proline (Pro, P)
n = 24 (7.41%)
Phenylalanine (Phe, F)
n = 20 (6.17%)
Tyrosine (Tyr, Y)
n = 13 (4.01%)
Tryptophan (Trp, W)
n = 8 (2.47%)
Aspartic acid (Asp, D)
n = 4 (1.23%)
Glutamic acid (Glu, E)
n = 11 (3.4%)
Asparagine (Asn, N)
n = 11 (3.4%)
Glutamine (Gln, Q)
n = 6 (1.85%)
Histidine (His, H)
n = 3 (0.93%)
Lysine (Lys, K)
n = 7 (2.16%)
Arginine (Arg, R)
n = 8 (2.47%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
5 16 8 8 13 28 6 8 6 0 1 4 8 0 6 14
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
5 1 1 6 15 12 0 0 11 3 0 2 11 10 1 4
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
13 6 0 3 7 12 0 0 5 5 8 2 0 3 8 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
3 11 0 1 3 7 0 1 2 5 0 0 0 1 0 6
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
75 96 80 74
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
37 102 56 130
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
14 134 131 46
ND2 (size: 1041 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 12 (3.47%)
Alanine (Ala, A)
n = 33 (9.54%)
Serine (Ser, S)
n = 29 (8.38%)
Threonine (Thr, T)
n = 46 (13.29%)
Cysteine (Cys, C)
n = 1 (0.29%)
Valine (Val, V)
n = 5 (1.45%)
Leucine (Leu, L)
n = 63 (18.21%)
Isoleucine (Ile, I)
n = 29 (8.38%)
Methionine (Met, M)
n = 22 (6.36%)
Proline (Pro, P)
n = 23 (6.65%)
Phenylalanine (Phe, F)
n = 15 (4.34%)
Tyrosine (Tyr, Y)
n = 7 (2.02%)
Tryptophan (Trp, W)
n = 9 (2.6%)
Aspartic acid (Asp, D)
n = 1 (0.29%)
Glutamic acid (Glu, E)
n = 5 (1.45%)
Asparagine (Asn, N)
n = 14 (4.05%)
Glutamine (Gln, Q)
n = 11 (3.18%)
Histidine (His, H)
n = 5 (1.45%)
Lysine (Lys, K)
n = 13 (3.76%)
Arginine (Arg, R)
n = 3 (0.87%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
10 19 21 8 14 27 5 9 9 2 1 2 2 0 3 12
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
1 0 1 5 16 12 0 1 4 6 1 4 10 8 1 6
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
19 19 2 3 10 12 0 1 3 3 4 0 0 0 14 1
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
4 4 1 0 1 12 1 0 1 2 0 0 0 1 0 9
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
56 96 128 67
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
29 127 57 134
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
14 134 153 46
ND3 (size: 1041 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 12 (3.47%)
Alanine (Ala, A)
n = 33 (9.54%)
Serine (Ser, S)
n = 29 (8.38%)
Threonine (Thr, T)
n = 46 (13.29%)
Cysteine (Cys, C)
n = 1 (0.29%)
Valine (Val, V)
n = 5 (1.45%)
Leucine (Leu, L)
n = 63 (18.21%)
Isoleucine (Ile, I)
n = 29 (8.38%)
Methionine (Met, M)
n = 22 (6.36%)
Proline (Pro, P)
n = 23 (6.65%)
Phenylalanine (Phe, F)
n = 15 (4.34%)
Tyrosine (Tyr, Y)
n = 7 (2.02%)
Tryptophan (Trp, W)
n = 9 (2.6%)
Aspartic acid (Asp, D)
n = 1 (0.29%)
Glutamic acid (Glu, E)
n = 5 (1.45%)
Asparagine (Asn, N)
n = 14 (4.05%)
Glutamine (Gln, Q)
n = 11 (3.18%)
Histidine (His, H)
n = 5 (1.45%)
Lysine (Lys, K)
n = 13 (3.76%)
Arginine (Arg, R)
n = 3 (0.87%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
10 19 21 8 14 27 5 9 9 2 1 2 2 0 3 12
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
1 0 1 5 16 12 0 1 4 6 1 4 10 8 1 6
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
19 19 2 3 10 12 0 1 3 3 4 0 0 0 14 1
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
4 4 1 0 1 12 1 0 1 2 0 0 0 1 0 9
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
56 96 128 67
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
29 127 57 134
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
14 134 153 46
ND4 (size: 1378 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 17 (3.71%)
Alanine (Ala, A)
n = 33 (7.21%)
Serine (Ser, S)
n = 37 (8.08%)
Threonine (Thr, T)
n = 52 (11.35%)
Cysteine (Cys, C)
n = 3 (0.66%)
Valine (Val, V)
n = 7 (1.53%)
Leucine (Leu, L)
n = 109 (23.8%)
Isoleucine (Ile, I)
n = 33 (7.21%)
Methionine (Met, M)
n = 26 (5.68%)
Proline (Pro, P)
n = 30 (6.55%)
Phenylalanine (Phe, F)
n = 11 (2.4%)
Tyrosine (Tyr, Y)
n = 12 (2.62%)
Tryptophan (Trp, W)
n = 12 (2.62%)
Aspartic acid (Asp, D)
n = 4 (0.87%)
Glutamic acid (Glu, E)
n = 7 (1.53%)
Asparagine (Asn, N)
n = 13 (2.84%)
Glutamine (Gln, Q)
n = 13 (2.84%)
Histidine (His, H)
n = 18 (3.93%)
Lysine (Lys, K)
n = 10 (2.18%)
Arginine (Arg, R)
n = 12 (2.62%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
6 27 24 12 35 39 7 14 13 0 0 1 6 0 2 9
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 1 2 3 10 19 1 1 6 9 1 1 14 15 0 10
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
27 14 1 2 10 14 0 1 10 1 11 1 2 3 10 5
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
13 6 1 0 4 10 0 1 1 10 0 0 0 0 0 11
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
68 166 145 80
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
55 141 77 186
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
16 190 204 49
ND4L (size: 297 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 4 (4.08%)
Alanine (Ala, A)
n = 9 (9.18%)
Serine (Ser, S)
n = 13 (13.27%)
Threonine (Thr, T)
n = 9 (9.18%)
Cysteine (Cys, C)
n = 4 (4.08%)
Valine (Val, V)
n = 1 (1.02%)
Leucine (Leu, L)
n = 22 (22.45%)
Isoleucine (Ile, I)
n = 4 (4.08%)
Methionine (Met, M)
n = 7 (7.14%)
Proline (Pro, P)
n = 2 (2.04%)
Phenylalanine (Phe, F)
n = 4 (4.08%)
Tyrosine (Tyr, Y)
n = 2 (2.04%)
Tryptophan (Trp, W)
n = 0 (0%)
Aspartic acid (Asp, D)
n = 1 (1.02%)
Glutamic acid (Glu, E)
n = 3 (3.06%)
Asparagine (Asn, N)
n = 3 (3.06%)
Glutamine (Gln, Q)
n = 2 (2.04%)
Histidine (His, H)
n = 6 (6.12%)
Lysine (Lys, K)
n = 0 (0%)
Arginine (Arg, R)
n = 2 (2.04%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
2 2 5 1 2 16 1 1 2 0 0 0 1 0 0 4
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 2 2 3 6 0 0 1 3 0 0 1 1 0 0 3
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
3 2 1 1 4 4 0 0 4 0 2 0 1 1 2 2
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
4 3 0 0 1 0 0 0 2 0 0 0 0 1 0 0
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
18 32 27 22
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
14 29 18 38
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
5 42 35 17
ND5 (size: 1818 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 33 (5.45%)
Alanine (Ala, A)
n = 46 (7.6%)
Serine (Ser, S)
n = 42 (6.94%)
Threonine (Thr, T)
n = 84 (13.88%)
Cysteine (Cys, C)
n = 6 (0.99%)
Valine (Val, V)
n = 12 (1.98%)
Leucine (Leu, L)
n = 102 (16.86%)
Isoleucine (Ile, I)
n = 54 (8.93%)
Methionine (Met, M)
n = 28 (4.63%)
Proline (Pro, P)
n = 27 (4.46%)
Phenylalanine (Phe, F)
n = 33 (5.45%)
Tyrosine (Tyr, Y)
n = 13 (2.15%)
Tryptophan (Trp, W)
n = 12 (1.98%)
Aspartic acid (Asp, D)
n = 7 (1.16%)
Glutamic acid (Glu, E)
n = 11 (1.82%)
Asparagine (Asn, N)
n = 30 (4.96%)
Glutamine (Gln, Q)
n = 17 (2.81%)
Histidine (His, H)
n = 15 (2.48%)
Lysine (Lys, K)
n = 24 (3.97%)
Arginine (Arg, R)
n = 9 (1.49%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
14 40 23 8 16 56 11 10 16 1 0 5 6 1 4 29
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
5 0 6 7 24 14 1 2 11 20 0 3 16 8 0 10
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
38 35 1 1 16 16 1 0 8 2 11 1 1 0 30 4
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
11 10 1 3 4 24 0 0 4 5 0 1 0 0 0 11
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
109 159 229 109
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
69 191 117 229
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
24 269 255 58
ND6 (size: 522 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 30 (17.34%)
Alanine (Ala, A)
n = 12 (6.94%)
Serine (Ser, S)
n = 12 (6.94%)
Threonine (Thr, T)
n = 3 (1.73%)
Cysteine (Cys, C)
n = 4 (2.31%)
Valine (Val, V)
n = 33 (19.08%)
Leucine (Leu, L)
n = 26 (15.03%)
Isoleucine (Ile, I)
n = 4 (2.31%)
Methionine (Met, M)
n = 7 (4.05%)
Proline (Pro, P)
n = 5 (2.89%)
Phenylalanine (Phe, F)
n = 14 (8.09%)
Tyrosine (Tyr, Y)
n = 7 (4.05%)
Tryptophan (Trp, W)
n = 4 (2.31%)
Aspartic acid (Asp, D)
n = 3 (1.73%)
Glutamic acid (Glu, E)
n = 2 (1.16%)
Asparagine (Asn, N)
n = 2 (1.16%)
Glutamine (Gln, Q)
n = 0 (0%)
Histidine (His, H)
n = 0 (0%)
Lysine (Lys, K)
n = 0 (0%)
Arginine (Arg, R)
n = 5 (2.89%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
4 0 1 3 0 0 3 6 0 0 19 0 3 11 13 1
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
6 4 0 3 0 3 6 8 0 5 17 2 1 0 2 3
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
0 0 0 7 0 0 1 4 0 7 0 3 14 2 0 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
0 0 2 2 1 0 0 0 0 2 3 0 0 0 1 1
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
80 16 20 58
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
47 28 15 84
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
69 3 21 81
Total protein-coding genes (size: 11396 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 223 (5.87%)
Alanine (Ala, A)
n = 298 (7.85%)
Serine (Ser, S)
n = 270 (7.11%)
Threonine (Thr, T)
n = 365 (9.61%)
Cysteine (Cys, C)
n = 30 (0.79%)
Valine (Val, V)
n = 152 (4.0%)
Leucine (Leu, L)
n = 680 (17.91%)
Isoleucine (Ile, I)
n = 287 (7.56%)
Methionine (Met, M)
n = 175 (4.61%)
Proline (Pro, P)
n = 226 (5.95%)
Phenylalanine (Phe, F)
n = 215 (5.66%)
Tyrosine (Tyr, Y)
n = 111 (2.92%)
Tryptophan (Trp, W)
n = 104 (2.74%)
Aspartic acid (Asp, D)
n = 64 (1.69%)
Glutamic acid (Glu, E)
n = 88 (2.32%)
Asparagine (Asn, N)
n = 136 (3.58%)
Glutamine (Gln, Q)
n = 97 (2.55%)
Histidine (His, H)
n = 105 (2.77%)
Lysine (Lys, K)
n = 89 (2.34%)
Arginine (Arg, R)
n = 72 (1.9%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
84 203 143 68 152 317 47 76 89 8 32 37 63 19 52 163
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
32 10 20 50 137 101 10 19 70 106 28 21 107 92 6 57
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
169 132 7 29 88 97 2 7 46 34 77 14 20 14 122 21
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
84 80 8 13 51 87 2 3 21 45 3 1 1 8 1 90
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
824 1084 1107 781
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
484 1105 699 1508
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
208 1547 1527 514 

Error: F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ ?​t​e​r​m​=​(​"​F​a​l​c​o​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ s​p​a​r​v​e​r​i​u​s​"​[​O​r​g​a​n​i​s​m​]​)​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ A​N​D​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ (​r​e​f​s​e​q​[​f​i​l​t​e​r​]​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ A​N​D​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ m​i​t​o​c​h​o​n​d​r​i​o​n​[​f​i​l​t​e​r​]​)​
Contact: Vadim E. Fraifeld, MD, PhD

Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel

Email:
How to cite us:

If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.