Viewing data for Proteus anguinus


Scientific name Proteus anguinus
Common name Olm
Maximum lifespan 102.00 years (Proteus anguinus@AnAge)

Total mtDNA (size: 16584 bases) GC AT G C A T
Base content (bases) 6908 9605 4428 2480 4496 5109
Base content per 1 kb (bases) 417 579 267 150 271 308
Base content (%) 41.7% 57.9%
Total protein-coding genes (size: 11327 bases) GC AT G C A T
Base content (bases) 4823 6504 3212 1611 3150 3354
Base content per 1 kb (bases) 426 574 284 142 278 296
Base content (%) 42.6% 57.4%
D-loop (size: 960 bases) GC AT G C A T
Base content (bases) 353 607 220 133 291 316
Base content per 1 kb (bases) 368 632 229 139 303 329
Base content (%) 36.8% 63.2%
Total tRNA-coding genes (size: 1525 bases) GC AT G C A T
Base content (bases) 591 863 343 248 396 467
Base content per 1 kb (bases) 388 566 225 163 260 306
Base content (%) 38.8% 56.6%
Total rRNA-coding genes (size: 2455 bases) GC AT G C A T
Base content (bases) 960 1495 522 438 577 918
Base content per 1 kb (bases) 391 609 213 178 235 374
Base content (%) 39.1% 60.9%
12S rRNA gene (size: 911 bases) GC AT G C A T
Base content (bases) 400 511 228 172 202 309
Base content per 1 kb (bases) 439 561 250 189 222 339
Base content (%) 43.9% 56.1%
16S rRNA gene (size: 1544 bases) GC AT G C A T
Base content (bases) 560 984 294 266 375 609
Base content per 1 kb (bases) 363 637 190 172 243 394
Base content (%) 36.3% 63.7%

ATP6 (size: 684 bases) GC AT G C A T
Base content (bases) 290 394 202 88 197 197
Base content per 1 kb (bases) 424 576 295 129 288 288
Base content (%) 42.4% 57.6%
ATP8 (size: 168 bases) GC AT G C A T
Base content (bases) 56 112 45 11 49 63
Base content per 1 kb (bases) 333 667 268 65 292 375
Base content (%) 33.3% 66.7%
COX1 (size: 1551 bases) GC AT G C A T
Base content (bases) 714 837 430 284 445 392
Base content per 1 kb (bases) 460 540 277 183 287 253
Base content (%) 46.0% 54.0%
COX2 (size: 688 bases) GC AT G C A T
Base content (bases) 288 400 179 109 193 207
Base content per 1 kb (bases) 419 581 260 158 281 301
Base content (%) 41.9% 58.1%
COX3 (size: 784 bases) GC AT G C A T
Base content (bases) 359 425 232 127 212 213
Base content per 1 kb (bases) 458 542 296 162 270 272
Base content (%) 45.8% 54.2%
CYTB (size: 1141 bases) GC AT G C A T
Base content (bases) 495 646 324 171 329 317
Base content per 1 kb (bases) 434 566 284 150 288 278
Base content (%) 43.4% 56.6%
ND1 (size: 967 bases) GC AT G C A T
Base content (bases) 382 585 263 119 286 299
Base content per 1 kb (bases) 395 605 272 123 296 309
Base content (%) 39.5% 60.5%
ND2 (size: 1039 bases) GC AT G C A T
Base content (bases) 424 615 311 113 283 332
Base content per 1 kb (bases) 408 592 299 109 272 320
Base content (%) 40.8% 59.2%
ND3 (size: 344 bases) GC AT G C A T
Base content (bases) 150 194 94 56 105 89
Base content per 1 kb (bases) 436 564 273 163 305 259
Base content (%) 43.6% 56.4%
ND4 (size: 1369 bases) GC AT G C A T
Base content (bases) 597 772 397 200 385 387
Base content per 1 kb (bases) 436 564 290 146 281 283
Base content (%) 43.6% 56.4%
ND4L (size: 297 bases) GC AT G C A T
Base content (bases) 135 162 90 45 84 78
Base content per 1 kb (bases) 455 545 303 152 283 263
Base content (%) 45.5% 54.5%
ND5 (size: 1827 bases) GC AT G C A T
Base content (bases) 739 1088 507 232 504 584
Base content per 1 kb (bases) 404 596 278 127 276 320
Base content (%) 40.4% 59.6%
ND6 (size: 510 bases) GC AT G C A T
Base content (bases) 212 298 151 61 86 212
Base content per 1 kb (bases) 416 584 296 120 169 416
Base content (%) 41.6% 58.4%

ATP6 (size: 684 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 10 (4.41%)
Alanine (Ala, A)
n = 17 (7.49%)
Serine (Ser, S)
n = 9 (3.96%)
Threonine (Thr, T)
n = 26 (11.45%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 13 (5.73%)
Leucine (Leu, L)
n = 49 (21.59%)
Isoleucine (Ile, I)
n = 18 (7.93%)
Methionine (Met, M)
n = 13 (5.73%)
Proline (Pro, P)
n = 17 (7.49%)
Phenylalanine (Phe, F)
n = 12 (5.29%)
Tyrosine (Tyr, Y)
n = 3 (1.32%)
Tryptophan (Trp, W)
n = 4 (1.76%)
Aspartic acid (Asp, D)
n = 1 (0.44%)
Glutamic acid (Glu, E)
n = 4 (1.76%)
Asparagine (Asn, N)
n = 11 (4.85%)
Glutamine (Gln, Q)
n = 8 (3.52%)
Histidine (His, H)
n = 4 (1.76%)
Lysine (Lys, K)
n = 4 (1.76%)
Arginine (Arg, R)
n = 4 (1.76%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
8 10 10 11 9 13 4 7 7 1 4 2 6 1 8 4
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
3 0 0 3 8 5 1 1 4 3 2 2 4 11 0 5
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
12 7 2 2 2 1 0 1 3 2 1 1 5 6 5 2
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
2 4 0 0 1 3 1 0 0 4 0 0 0 1 0 3
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
45 70 76 37
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
22 65 36 105
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
21 67 85 55
ATP8 (size: 168 bases)
Amino acid sequence: MPQLTPGPWLMILLTSWLIYFILLMPKINYFNVPNAPTHKKTYKTKPHHWNWPWT*
Amino acid frequencies:
Glycine (Gly, G)
n = 1 (1.82%)
Alanine (Ala, A)
n = 1 (1.82%)
Serine (Ser, S)
n = 1 (1.82%)
Threonine (Thr, T)
n = 6 (10.91%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 1 (1.82%)
Leucine (Leu, L)
n = 7 (12.73%)
Isoleucine (Ile, I)
n = 4 (7.27%)
Methionine (Met, M)
n = 3 (5.45%)
Proline (Pro, P)
n = 8 (14.55%)
Phenylalanine (Phe, F)
n = 2 (3.64%)
Tyrosine (Tyr, Y)
n = 3 (5.45%)
Tryptophan (Trp, W)
n = 5 (9.09%)
Aspartic acid (Asp, D)
n = 0 (0%)
Glutamic acid (Glu, E)
n = 0 (0%)
Asparagine (Asn, N)
n = 4 (7.27%)
Glutamine (Gln, Q)
n = 1 (1.82%)
Histidine (His, H)
n = 3 (5.45%)
Lysine (Lys, K)
n = 5 (9.09%)
Arginine (Arg, R)
n = 0 (0%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
2 2 2 3 0 1 1 2 1 0 0 1 0 0 2 0
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
1 0 0 0 1 0 0 0 1 0 0 1 1 6 0 2
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
3 1 0 0 1 0 0 0 0 3 0 0 0 4 0 1
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
2 0 0 0 0 5 0 0 0 0 0 0 0 1 0 5
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
3 17 22 14
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
6 16 17 17
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
2 12 24 18
COX1 (size: 1551 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 44 (8.53%)
Alanine (Ala, A)
n = 46 (8.91%)
Serine (Ser, S)
n = 33 (6.4%)
Threonine (Thr, T)
n = 36 (6.98%)
Cysteine (Cys, C)
n = 1 (0.19%)
Valine (Val, V)
n = 44 (8.53%)
Leucine (Leu, L)
n = 60 (11.63%)
Isoleucine (Ile, I)
n = 33 (6.4%)
Methionine (Met, M)
n = 32 (6.2%)
Proline (Pro, P)
n = 28 (5.43%)
Phenylalanine (Phe, F)
n = 40 (7.75%)
Tyrosine (Tyr, Y)
n = 18 (3.49%)
Tryptophan (Trp, W)
n = 17 (3.29%)
Aspartic acid (Asp, D)
n = 15 (2.91%)
Glutamic acid (Glu, E)
n = 10 (1.94%)
Asparagine (Asn, N)
n = 16 (3.1%)
Glutamine (Gln, Q)
n = 7 (1.36%)
Histidine (His, H)
n = 18 (3.49%)
Lysine (Lys, K)
n = 9 (1.74%)
Arginine (Arg, R)
n = 9 (1.74%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
16 17 23 14 15 19 7 4 5 2 10 11 17 6 27 13
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
9 1 0 11 20 13 2 6 17 14 7 3 10 11 4 6
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
15 15 0 8 9 10 0 0 6 7 11 3 1 7 9 4
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
14 8 2 6 9 8 1 1 0 4 4 0 0 1 0 14
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
159 117 132 109
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
77 137 94 209
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
48 176 166 127
COX2 (size: 688 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 8 (3.51%)
Alanine (Ala, A)
n = 21 (9.21%)
Serine (Ser, S)
n = 18 (7.89%)
Threonine (Thr, T)
n = 12 (5.26%)
Cysteine (Cys, C)
n = 2 (0.88%)
Valine (Val, V)
n = 11 (4.82%)
Leucine (Leu, L)
n = 25 (10.96%)
Isoleucine (Ile, I)
n = 22 (9.65%)
Methionine (Met, M)
n = 17 (7.46%)
Proline (Pro, P)
n = 14 (6.14%)
Phenylalanine (Phe, F)
n = 10 (4.39%)
Tyrosine (Tyr, Y)
n = 8 (3.51%)
Tryptophan (Trp, W)
n = 5 (2.19%)
Aspartic acid (Asp, D)
n = 12 (5.26%)
Glutamic acid (Glu, E)
n = 13 (5.7%)
Asparagine (Asn, N)
n = 7 (3.07%)
Glutamine (Gln, Q)
n = 8 (3.51%)
Histidine (His, H)
n = 7 (3.07%)
Lysine (Lys, K)
n = 3 (1.32%)
Arginine (Arg, R)
n = 6 (2.63%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
12 10 11 6 2 8 1 6 7 1 5 3 2 1 8 2
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
6 2 0 4 10 6 1 1 4 1 2 2 1 9 2 1
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
5 6 0 3 7 4 0 0 4 4 4 0 2 3 4 3
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
4 11 2 6 6 3 0 0 0 5 1 0 0 0 0 5
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
65 52 65 47
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
25 61 58 85
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
19 66 84 60
COX3 (size: 784 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 20 (7.69%)
Alanine (Ala, A)
n = 24 (9.23%)
Serine (Ser, S)
n = 14 (5.38%)
Threonine (Thr, T)
n = 21 (8.08%)
Cysteine (Cys, C)
n = 2 (0.77%)
Valine (Val, V)
n = 15 (5.77%)
Leucine (Leu, L)
n = 33 (12.69%)
Isoleucine (Ile, I)
n = 16 (6.15%)
Methionine (Met, M)
n = 10 (3.85%)
Proline (Pro, P)
n = 13 (5.0%)
Phenylalanine (Phe, F)
n = 22 (8.46%)
Tyrosine (Tyr, Y)
n = 11 (4.23%)
Tryptophan (Trp, W)
n = 12 (4.62%)
Aspartic acid (Asp, D)
n = 5 (1.92%)
Glutamic acid (Glu, E)
n = 9 (3.46%)
Asparagine (Asn, N)
n = 5 (1.92%)
Glutamine (Gln, Q)
n = 7 (2.69%)
Histidine (His, H)
n = 15 (5.77%)
Lysine (Lys, K)
n = 2 (0.77%)
Arginine (Arg, R)
n = 5 (1.92%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
5 11 8 6 3 12 4 8 6 1 2 7 6 0 14 8
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 0 2 3 10 11 0 0 9 9 2 1 4 8 0 7
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
9 4 1 1 5 5 0 1 2 6 5 2 0 0 5 3
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
12 9 0 0 5 2 0 0 1 4 0 0 0 0 0 10
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
73 65 57 66
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
42 69 54 96
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
12 98 102 49
CYTB (size: 1141 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 26 (6.86%)
Alanine (Ala, A)
n = 26 (6.86%)
Serine (Ser, S)
n = 29 (7.65%)
Threonine (Thr, T)
n = 20 (5.28%)
Cysteine (Cys, C)
n = 3 (0.79%)
Valine (Val, V)
n = 19 (5.01%)
Leucine (Leu, L)
n = 53 (13.98%)
Isoleucine (Ile, I)
n = 31 (8.18%)
Methionine (Met, M)
n = 19 (5.01%)
Proline (Pro, P)
n = 22 (5.8%)
Phenylalanine (Phe, F)
n = 34 (8.97%)
Tyrosine (Tyr, Y)
n = 13 (3.43%)
Tryptophan (Trp, W)
n = 11 (2.9%)
Aspartic acid (Asp, D)
n = 10 (2.64%)
Glutamic acid (Glu, E)
n = 6 (1.58%)
Asparagine (Asn, N)
n = 17 (4.49%)
Glutamine (Gln, Q)
n = 10 (2.64%)
Histidine (His, H)
n = 13 (3.43%)
Lysine (Lys, K)
n = 10 (2.64%)
Arginine (Arg, R)
n = 8 (2.11%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
13 18 15 11 10 14 7 11 8 2 4 2 13 0 13 21
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
4 0 3 6 13 6 1 3 7 8 8 1 5 13 3 5
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
7 8 0 2 6 17 1 0 3 3 10 3 0 6 11 2
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
11 6 0 4 6 8 2 1 2 3 2 0 0 0 0 8
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
87 95 100 98
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
51 94 79 156
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
33 135 138 74
ND1 (size: 967 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 16 (4.98%)
Alanine (Ala, A)
n = 23 (7.17%)
Serine (Ser, S)
n = 24 (7.48%)
Threonine (Thr, T)
n = 23 (7.17%)
Cysteine (Cys, C)
n = 1 (0.31%)
Valine (Val, V)
n = 11 (3.43%)
Leucine (Leu, L)
n = 59 (18.38%)
Isoleucine (Ile, I)
n = 33 (10.28%)
Methionine (Met, M)
n = 18 (5.61%)
Proline (Pro, P)
n = 21 (6.54%)
Phenylalanine (Phe, F)
n = 21 (6.54%)
Tyrosine (Tyr, Y)
n = 11 (3.43%)
Tryptophan (Trp, W)
n = 7 (2.18%)
Aspartic acid (Asp, D)
n = 3 (0.93%)
Glutamic acid (Glu, E)
n = 11 (3.43%)
Asparagine (Asn, N)
n = 16 (4.98%)
Glutamine (Gln, Q)
n = 6 (1.87%)
Histidine (His, H)
n = 3 (0.93%)
Lysine (Lys, K)
n = 7 (2.18%)
Arginine (Arg, R)
n = 8 (2.49%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
17 16 16 9 7 22 4 15 5 1 3 4 3 1 10 11
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 0 1 5 6 11 1 1 6 7 2 2 3 15 1 2
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
8 13 0 4 7 9 0 0 4 6 5 0 2 7 9 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
3 9 2 0 3 5 2 0 3 4 1 0 0 0 0 7
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
64 80 101 77
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
36 87 57 142
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
19 96 141 66
ND2 (size: 1039 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 14 (4.06%)
Alanine (Ala, A)
n = 24 (6.96%)
Serine (Ser, S)
n = 28 (8.12%)
Threonine (Thr, T)
n = 39 (11.3%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 11 (3.19%)
Leucine (Leu, L)
n = 69 (20.0%)
Isoleucine (Ile, I)
n = 26 (7.54%)
Methionine (Met, M)
n = 31 (8.99%)
Proline (Pro, P)
n = 20 (5.8%)
Phenylalanine (Phe, F)
n = 12 (3.48%)
Tyrosine (Tyr, Y)
n = 8 (2.32%)
Tryptophan (Trp, W)
n = 10 (2.9%)
Aspartic acid (Asp, D)
n = 2 (0.58%)
Glutamic acid (Glu, E)
n = 3 (0.87%)
Asparagine (Asn, N)
n = 14 (4.06%)
Glutamine (Gln, Q)
n = 12 (3.48%)
Histidine (His, H)
n = 9 (2.61%)
Lysine (Lys, K)
n = 11 (3.19%)
Arginine (Arg, R)
n = 3 (0.87%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
13 13 25 11 13 26 6 10 10 2 4 4 3 0 8 4
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
6 0 0 5 14 5 0 1 5 5 3 2 5 13 0 5
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
9 21 4 4 12 6 2 1 3 5 3 1 3 3 11 3
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
6 3 0 1 1 11 0 0 1 1 1 0 0 0 0 9
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
54 100 125 67
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
31 107 59 149
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
28 104 148 66
ND3 (size: 1039 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 14 (4.06%)
Alanine (Ala, A)
n = 24 (6.96%)
Serine (Ser, S)
n = 28 (8.12%)
Threonine (Thr, T)
n = 39 (11.3%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 11 (3.19%)
Leucine (Leu, L)
n = 69 (20.0%)
Isoleucine (Ile, I)
n = 26 (7.54%)
Methionine (Met, M)
n = 31 (8.99%)
Proline (Pro, P)
n = 20 (5.8%)
Phenylalanine (Phe, F)
n = 12 (3.48%)
Tyrosine (Tyr, Y)
n = 8 (2.32%)
Tryptophan (Trp, W)
n = 10 (2.9%)
Aspartic acid (Asp, D)
n = 2 (0.58%)
Glutamic acid (Glu, E)
n = 3 (0.87%)
Asparagine (Asn, N)
n = 14 (4.06%)
Glutamine (Gln, Q)
n = 12 (3.48%)
Histidine (His, H)
n = 9 (2.61%)
Lysine (Lys, K)
n = 11 (3.19%)
Arginine (Arg, R)
n = 3 (0.87%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
13 13 25 11 13 26 6 10 10 2 4 4 3 0 8 4
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
6 0 0 5 14 5 0 1 5 5 3 2 5 13 0 5
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
9 21 4 4 12 6 2 1 3 5 3 1 3 3 11 3
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
6 3 0 1 1 11 0 0 1 1 1 0 0 0 0 9
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
54 100 125 67
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
31 107 59 149
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
28 104 148 66
ND4 (size: 1369 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 23 (5.05%)
Alanine (Ala, A)
n = 39 (8.57%)
Serine (Ser, S)
n = 31 (6.81%)
Threonine (Thr, T)
n = 37 (8.13%)
Cysteine (Cys, C)
n = 4 (0.88%)
Valine (Val, V)
n = 23 (5.05%)
Leucine (Leu, L)
n = 84 (18.46%)
Isoleucine (Ile, I)
n = 40 (8.79%)
Methionine (Met, M)
n = 35 (7.69%)
Proline (Pro, P)
n = 24 (5.27%)
Phenylalanine (Phe, F)
n = 14 (3.08%)
Tyrosine (Tyr, Y)
n = 11 (2.42%)
Tryptophan (Trp, W)
n = 14 (3.08%)
Aspartic acid (Asp, D)
n = 3 (0.66%)
Glutamic acid (Glu, E)
n = 12 (2.64%)
Asparagine (Asn, N)
n = 13 (2.86%)
Glutamine (Gln, Q)
n = 12 (2.64%)
Histidine (His, H)
n = 13 (2.86%)
Lysine (Lys, K)
n = 13 (2.86%)
Arginine (Arg, R)
n = 11 (2.42%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
24 16 28 18 12 33 9 9 10 2 9 3 10 1 5 9
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
7 1 3 10 18 11 0 3 7 10 3 3 6 13 2 8
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
20 5 4 8 11 7 1 1 3 4 7 5 3 7 6 1
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
12 8 4 2 1 11 2 2 4 4 1 0 0 0 0 9
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
100 132 142 82
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
56 127 77 196
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
44 138 168 106
ND4L (size: 297 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 8 (8.16%)
Alanine (Ala, A)
n = 9 (9.18%)
Serine (Ser, S)
n = 6 (6.12%)
Threonine (Thr, T)
n = 9 (9.18%)
Cysteine (Cys, C)
n = 4 (4.08%)
Valine (Val, V)
n = 4 (4.08%)
Leucine (Leu, L)
n = 22 (22.45%)
Isoleucine (Ile, I)
n = 6 (6.12%)
Methionine (Met, M)
n = 7 (7.14%)
Proline (Pro, P)
n = 3 (3.06%)
Phenylalanine (Phe, F)
n = 5 (5.1%)
Tyrosine (Tyr, Y)
n = 0 (0%)
Tryptophan (Trp, W)
n = 1 (1.02%)
Aspartic acid (Asp, D)
n = 1 (1.02%)
Glutamic acid (Glu, E)
n = 2 (2.04%)
Asparagine (Asn, N)
n = 2 (2.04%)
Glutamine (Gln, Q)
n = 1 (1.02%)
Histidine (His, H)
n = 5 (5.1%)
Lysine (Lys, K)
n = 1 (1.02%)
Arginine (Arg, R)
n = 2 (2.04%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
3 3 6 4 4 8 1 5 1 0 1 1 2 0 2 3
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
1 1 3 2 5 2 0 1 2 4 1 0 0 3 0 1
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
4 3 1 1 3 0 1 1 0 0 0 0 0 1 1 1
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
4 2 0 0 1 1 0 0 2 0 0 0 0 1 0 1
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
24 28 26 21
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
16 26 13 44
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
5 36 39 19
ND5 (size: 1827 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 29 (4.77%)
Alanine (Ala, A)
n = 49 (8.06%)
Serine (Ser, S)
n = 49 (8.06%)
Threonine (Thr, T)
n = 56 (9.21%)
Cysteine (Cys, C)
n = 6 (0.99%)
Valine (Val, V)
n = 22 (3.62%)
Leucine (Leu, L)
n = 95 (15.63%)
Isoleucine (Ile, I)
n = 52 (8.55%)
Methionine (Met, M)
n = 38 (6.25%)
Proline (Pro, P)
n = 25 (4.11%)
Phenylalanine (Phe, F)
n = 38 (6.25%)
Tyrosine (Tyr, Y)
n = 11 (1.81%)
Tryptophan (Trp, W)
n = 13 (2.14%)
Aspartic acid (Asp, D)
n = 14 (2.3%)
Glutamic acid (Glu, E)
n = 12 (1.97%)
Asparagine (Asn, N)
n = 27 (4.44%)
Glutamine (Gln, Q)
n = 21 (3.45%)
Histidine (His, H)
n = 14 (2.3%)
Lysine (Lys, K)
n = 26 (4.28%)
Arginine (Arg, R)
n = 11 (1.81%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
31 21 32 11 18 42 6 18 19 2 4 4 10 4 23 15
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
6 1 5 7 25 16 1 3 12 10 4 4 4 16 1 10
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
21 24 1 12 16 8 1 2 10 3 8 3 0 14 13 4
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
10 8 4 6 8 25 1 0 2 8 1 0 0 1 0 10
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
126 148 211 124
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
71 167 126 245
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
35 192 247 135
ND6 (size: 510 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 20 (11.83%)
Alanine (Ala, A)
n = 18 (10.65%)
Serine (Ser, S)
n = 12 (7.1%)
Threonine (Thr, T)
n = 3 (1.78%)
Cysteine (Cys, C)
n = 2 (1.18%)
Valine (Val, V)
n = 26 (15.38%)
Leucine (Leu, L)
n = 29 (17.16%)
Isoleucine (Ile, I)
n = 7 (4.14%)
Methionine (Met, M)
n = 9 (5.33%)
Proline (Pro, P)
n = 5 (2.96%)
Phenylalanine (Phe, F)
n = 12 (7.1%)
Tyrosine (Tyr, Y)
n = 8 (4.73%)
Tryptophan (Trp, W)
n = 7 (4.14%)
Aspartic acid (Asp, D)
n = 0 (0%)
Glutamic acid (Glu, E)
n = 4 (2.37%)
Asparagine (Asn, N)
n = 5 (2.96%)
Glutamine (Gln, Q)
n = 0 (0%)
Histidine (His, H)
n = 0 (0%)
Lysine (Lys, K)
n = 0 (0%)
Arginine (Arg, R)
n = 2 (1.18%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
6 1 7 5 0 0 1 12 0 0 9 2 9 6 10 2
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 2 0 5 3 5 5 9 1 1 9 2 1 2 0 2
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
0 0 1 5 0 2 1 4 0 6 2 6 11 3 2 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
0 1 3 0 0 0 0 1 0 0 1 0 1 0 0 1
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
68 13 29 60
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
36 34 17 83
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
47 14 40 69
Total protein-coding genes (size: 11369 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 224 (5.92%)
Alanine (Ala, A)
n = 307 (8.11%)
Serine (Ser, S)
n = 263 (6.95%)
Threonine (Thr, T)
n = 298 (7.87%)
Cysteine (Cys, C)
n = 26 (0.69%)
Valine (Val, V)
n = 203 (5.36%)
Leucine (Leu, L)
n = 609 (16.09%)
Isoleucine (Ile, I)
n = 295 (7.79%)
Methionine (Met, M)
n = 238 (6.29%)
Proline (Pro, P)
n = 208 (5.49%)
Phenylalanine (Phe, F)
n = 231 (6.1%)
Tyrosine (Tyr, Y)
n = 107 (2.83%)
Tryptophan (Trp, W)
n = 110 (2.91%)
Aspartic acid (Asp, D)
n = 69 (1.82%)
Glutamic acid (Glu, E)
n = 92 (2.43%)
Asparagine (Asn, N)
n = 138 (3.65%)
Glutamine (Gln, Q)
n = 96 (2.54%)
Histidine (His, H)
n = 104 (2.75%)
Lysine (Lys, K)
n = 92 (2.43%)
Arginine (Arg, R)
n = 71 (1.88%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
155 140 188 112 96 205 57 112 82 14 56 44 82 21 137 94
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
50 9 17 63 137 95 12 29 78 73 44 24 46 123 15 56
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
116 112 14 52 80 74 7 11 39 51 56 26 27 61 77 24
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
80 73 19 25 44 82 10 5 16 38 12 0 1 5 0 84
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
895 949 1112 831
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
482 1026 703 1576
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
329 1160 1428 870 

Error: F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ ?​t​e​r​m​=​(​"​P​r​o​t​e​u​s​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ a​n​g​u​i​n​u​s​"​[​O​r​g​a​n​i​s​m​]​)​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ A​N​D​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ (​r​e​f​s​e​q​[​f​i​l​t​e​r​]​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ A​N​D​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ m​i​t​o​c​h​o​n​d​r​i​o​n​[​f​i​l​t​e​r​]​)​
Contact: Vadim E. Fraifeld, MD, PhD

Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel

Email:
How to cite us:

If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.