Viewing data for Chelon labrosus


Scientific name Chelon labrosus
Common name Thicklipped mullet
Maximum lifespan 25.00 years (Chelon labrosus@AnAge)

Total mtDNA (size: 16898 bases) GC AT G C A T
Base content (bases) 7756 9142 5009 2747 4485 4657
Base content per 1 kb (bases) 459 541 296 163 265 276
Base content (%) 45.9% 54.1%
Total protein-coding genes (size: 11456 bases) GC AT G C A T
Base content (bases) 5412 6044 3688 1724 3128 2916
Base content per 1 kb (bases) 472 528 322 150 273 255
Base content (%) 47.2% 52.8%
D-loop (size: 1149 bases) GC AT G C A T
Base content (bases) 405 744 235 170 362 382
Base content per 1 kb (bases) 352 648 205 148 315 332
Base content (%) 35.2% 64.8%
Total tRNA-coding genes (size: 1556 bases) GC AT G C A T
Base content (bases) 667 889 368 299 399 490
Base content per 1 kb (bases) 429 571 237 192 256 315
Base content (%) 42.9% 57.1%
Total rRNA-coding genes (size: 2645 bases) GC AT G C A T
Base content (bases) 1226 1419 685 541 576 843
Base content per 1 kb (bases) 464 536 259 205 218 319
Base content (%) 46.4% 53.6%
12S rRNA gene (size: 953 bases) GC AT G C A T
Base content (bases) 458 495 255 203 206 289
Base content per 1 kb (bases) 481 519 268 213 216 303
Base content (%) 48.1% 51.9%
16S rRNA gene (size: 1692 bases) GC AT G C A T
Base content (bases) 768 924 430 338 370 554
Base content per 1 kb (bases) 454 546 254 200 219 327
Base content (%) 45.4% 54.6%

ATP6 (size: 684 bases) GC AT G C A T
Base content (bases) 317 367 221 96 198 169
Base content per 1 kb (bases) 463 537 323 140 289 247
Base content (%) 46.3% 53.7%
ATP8 (size: 168 bases) GC AT G C A T
Base content (bases) 78 90 57 21 46 44
Base content per 1 kb (bases) 464 536 339 125 274 262
Base content (%) 46.4% 53.6%
COX1 (size: 1596 bases) GC AT G C A T
Base content (bases) 740 856 454 286 449 407
Base content per 1 kb (bases) 464 536 284 179 281 255
Base content (%) 46.4% 53.6%
COX2 (size: 691 bases) GC AT G C A T
Base content (bases) 314 377 202 112 184 193
Base content per 1 kb (bases) 454 546 292 162 266 279
Base content (%) 45.4% 54.6%
COX3 (size: 784 bases) GC AT G C A T
Base content (bases) 381 403 248 133 214 189
Base content per 1 kb (bases) 486 514 316 170 273 241
Base content (%) 48.6% 51.4%
CYTB (size: 1138 bases) GC AT G C A T
Base content (bases) 515 623 350 165 339 284
Base content per 1 kb (bases) 453 547 308 145 298 250
Base content (%) 45.3% 54.7%
ND1 (size: 975 bases) GC AT G C A T
Base content (bases) 461 514 311 150 278 236
Base content per 1 kb (bases) 473 527 319 154 285 242
Base content (%) 47.3% 52.7%
ND2 (size: 1045 bases) GC AT G C A T
Base content (bases) 500 545 376 124 275 270
Base content per 1 kb (bases) 478 522 360 119 263 258
Base content (%) 47.8% 52.2%
ND3 (size: 349 bases) GC AT G C A T
Base content (bases) 162 187 110 52 107 80
Base content per 1 kb (bases) 464 536 315 149 307 229
Base content (%) 46.4% 53.6%
ND4 (size: 1381 bases) GC AT G C A T
Base content (bases) 664 717 453 211 376 341
Base content per 1 kb (bases) 481 519 328 153 272 247
Base content (%) 48.1% 51.9%
ND4L (size: 297 bases) GC AT G C A T
Base content (bases) 149 148 103 46 87 61
Base content per 1 kb (bases) 502 498 347 155 293 205
Base content (%) 50.2% 49.8%
ND5 (size: 1848 bases) GC AT G C A T
Base content (bases) 884 964 628 256 491 473
Base content per 1 kb (bases) 478 522 340 139 266 256
Base content (%) 47.8% 52.2%
ND6 (size: 522 bases) GC AT G C A T
Base content (bases) 253 269 179 74 89 180
Base content per 1 kb (bases) 485 515 343 142 170 345
Base content (%) 48.5% 51.5%

ATP6 (size: 684 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 9 (3.96%)
Alanine (Ala, A)
n = 20 (8.81%)
Serine (Ser, S)
n = 11 (4.85%)
Threonine (Thr, T)
n = 21 (9.25%)
Cysteine (Cys, C)
n = 1 (0.44%)
Valine (Val, V)
n = 14 (6.17%)
Leucine (Leu, L)
n = 56 (24.67%)
Isoleucine (Ile, I)
n = 16 (7.05%)
Methionine (Met, M)
n = 6 (2.64%)
Proline (Pro, P)
n = 17 (7.49%)
Phenylalanine (Phe, F)
n = 14 (6.17%)
Tyrosine (Tyr, Y)
n = 3 (1.32%)
Tryptophan (Trp, W)
n = 5 (2.2%)
Aspartic acid (Asp, D)
n = 1 (0.44%)
Glutamic acid (Glu, E)
n = 4 (1.76%)
Asparagine (Asn, N)
n = 8 (3.52%)
Glutamine (Gln, Q)
n = 10 (4.41%)
Histidine (His, H)
n = 4 (1.76%)
Lysine (Lys, K)
n = 2 (0.88%)
Arginine (Arg, R)
n = 5 (2.2%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
9 7 4 12 13 19 6 6 6 4 3 3 5 3 9 5
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 0 1 4 9 6 1 2 5 2 0 3 9 5 0 3
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
5 10 3 2 1 2 0 2 4 1 2 1 0 4 4 2
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
2 3 1 0 1 2 0 1 1 2 1 0 0 1 0 4
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
48 86 59 35
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
26 63 33 106
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
22 72 77 57
ATP8 (size: 168 bases)
Amino acid sequence: MPQLNPAPWFLILVFSWFVFLTIIPPKILAHTLPNVPASQSTEKPKTETWSWPWH*
Amino acid frequencies:
Glycine (Gly, G)
n = 0 (0%)
Alanine (Ala, A)
n = 3 (5.45%)
Serine (Ser, S)
n = 4 (7.27%)
Threonine (Thr, T)
n = 5 (9.09%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 3 (5.45%)
Leucine (Leu, L)
n = 6 (10.91%)
Isoleucine (Ile, I)
n = 4 (7.27%)
Methionine (Met, M)
n = 1 (1.82%)
Proline (Pro, P)
n = 9 (16.36%)
Phenylalanine (Phe, F)
n = 4 (7.27%)
Tyrosine (Tyr, Y)
n = 0 (0%)
Tryptophan (Trp, W)
n = 5 (9.09%)
Aspartic acid (Asp, D)
n = 0 (0%)
Glutamic acid (Glu, E)
n = 2 (3.64%)
Asparagine (Asn, N)
n = 2 (3.64%)
Glutamine (Gln, Q)
n = 2 (3.64%)
Histidine (His, H)
n = 2 (3.64%)
Lysine (Lys, K)
n = 3 (5.45%)
Arginine (Arg, R)
n = 0 (0%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
0 4 0 4 0 1 0 1 1 1 0 0 2 1 1 3
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
1 0 0 1 2 0 0 0 0 0 0 4 2 2 1 1
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
3 1 0 2 1 0 0 0 1 0 0 2 0 1 1 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
2 1 1 0 0 3 0 0 0 0 0 0 0 1 0 3
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
8 18 16 14
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
6 20 12 18
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
7 19 16 14
COX1 (size: 1596 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 47 (8.85%)
Alanine (Ala, A)
n = 46 (8.66%)
Serine (Ser, S)
n = 30 (5.65%)
Threonine (Thr, T)
n = 39 (7.34%)
Cysteine (Cys, C)
n = 1 (0.19%)
Valine (Val, V)
n = 46 (8.66%)
Leucine (Leu, L)
n = 66 (12.43%)
Isoleucine (Ile, I)
n = 35 (6.59%)
Methionine (Met, M)
n = 25 (4.71%)
Proline (Pro, P)
n = 29 (5.46%)
Phenylalanine (Phe, F)
n = 41 (7.72%)
Tyrosine (Tyr, Y)
n = 19 (3.58%)
Tryptophan (Trp, W)
n = 18 (3.39%)
Aspartic acid (Asp, D)
n = 16 (3.01%)
Glutamic acid (Glu, E)
n = 12 (2.26%)
Asparagine (Asn, N)
n = 14 (2.64%)
Glutamine (Gln, Q)
n = 8 (1.51%)
Histidine (His, H)
n = 21 (3.95%)
Lysine (Lys, K)
n = 10 (1.88%)
Arginine (Arg, R)
n = 8 (1.51%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
15 20 11 11 16 23 4 11 7 1 7 14 21 4 17 24
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
14 1 0 5 22 15 4 9 15 15 8 13 9 7 0 6
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
15 16 2 7 11 7 0 0 5 8 11 0 1 5 9 5
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
16 12 0 8 8 9 1 2 0 5 1 0 0 1 0 18
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
167 120 128 117
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
79 139 101 213
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
40 195 178 119
COX2 (size: 691 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 9 (3.93%)
Alanine (Ala, A)
n = 16 (6.99%)
Serine (Ser, S)
n = 17 (7.42%)
Threonine (Thr, T)
n = 10 (4.37%)
Cysteine (Cys, C)
n = 2 (0.87%)
Valine (Val, V)
n = 19 (8.3%)
Leucine (Leu, L)
n = 29 (12.66%)
Isoleucine (Ile, I)
n = 19 (8.3%)
Methionine (Met, M)
n = 12 (5.24%)
Proline (Pro, P)
n = 14 (6.11%)
Phenylalanine (Phe, F)
n = 11 (4.8%)
Tyrosine (Tyr, Y)
n = 9 (3.93%)
Tryptophan (Trp, W)
n = 5 (2.18%)
Aspartic acid (Asp, D)
n = 13 (5.68%)
Glutamic acid (Glu, E)
n = 14 (6.11%)
Asparagine (Asn, N)
n = 5 (2.18%)
Glutamine (Gln, Q)
n = 8 (3.49%)
Histidine (His, H)
n = 9 (3.93%)
Lysine (Lys, K)
n = 3 (1.31%)
Arginine (Arg, R)
n = 6 (2.62%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
8 11 7 9 5 10 1 4 7 1 5 2 7 5 4 7
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
5 1 1 2 7 6 1 1 5 3 0 2 5 6 1 1
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
4 4 1 4 7 2 0 1 3 2 7 0 0 2 3 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
9 14 0 6 7 3 0 1 4 1 0 0 0 0 0 5
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
71 62 53 44
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
26 53 61 90
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
15 87 79 49
COX3 (size: 784 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 21 (8.08%)
Alanine (Ala, A)
n = 21 (8.08%)
Serine (Ser, S)
n = 14 (5.38%)
Threonine (Thr, T)
n = 24 (9.23%)
Cysteine (Cys, C)
n = 2 (0.77%)
Valine (Val, V)
n = 17 (6.54%)
Leucine (Leu, L)
n = 31 (11.92%)
Isoleucine (Ile, I)
n = 15 (5.77%)
Methionine (Met, M)
n = 8 (3.08%)
Proline (Pro, P)
n = 12 (4.62%)
Phenylalanine (Phe, F)
n = 23 (8.85%)
Tyrosine (Tyr, Y)
n = 13 (5.0%)
Tryptophan (Trp, W)
n = 12 (4.62%)
Aspartic acid (Asp, D)
n = 5 (1.92%)
Glutamic acid (Glu, E)
n = 9 (3.46%)
Asparagine (Asn, N)
n = 3 (1.15%)
Glutamine (Gln, Q)
n = 8 (3.08%)
Histidine (His, H)
n = 16 (6.15%)
Lysine (Lys, K)
n = 2 (0.77%)
Arginine (Arg, R)
n = 5 (1.92%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
3 12 6 2 9 10 4 4 6 2 3 6 6 2 7 16
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 0 2 8 7 5 1 5 9 5 2 5 5 2 0 7
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
12 4 1 4 2 5 0 0 3 3 10 1 2 0 3 2
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
14 9 0 1 4 2 0 2 0 3 0 0 0 0 0 11
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
73 66 55 67
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
43 68 56 94
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
17 114 78 52
CYTB (size: 1138 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 24 (6.35%)
Alanine (Ala, A)
n = 32 (8.47%)
Serine (Ser, S)
n = 22 (5.82%)
Threonine (Thr, T)
n = 20 (5.29%)
Cysteine (Cys, C)
n = 4 (1.06%)
Valine (Val, V)
n = 27 (7.14%)
Leucine (Leu, L)
n = 62 (16.4%)
Isoleucine (Ile, I)
n = 30 (7.94%)
Methionine (Met, M)
n = 10 (2.65%)
Proline (Pro, P)
n = 22 (5.82%)
Phenylalanine (Phe, F)
n = 28 (7.41%)
Tyrosine (Tyr, Y)
n = 15 (3.97%)
Tryptophan (Trp, W)
n = 13 (3.44%)
Aspartic acid (Asp, D)
n = 12 (3.17%)
Glutamic acid (Glu, E)
n = 6 (1.59%)
Asparagine (Asn, N)
n = 18 (4.76%)
Glutamine (Gln, Q)
n = 5 (1.32%)
Histidine (His, H)
n = 12 (3.17%)
Lysine (Lys, K)
n = 9 (2.38%)
Arginine (Arg, R)
n = 8 (2.12%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
14 16 5 13 25 14 3 5 5 0 13 7 7 0 10 18
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
5 1 3 3 7 21 1 3 11 10 0 6 10 6 0 6
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
6 8 0 5 10 5 0 1 1 6 9 1 2 7 11 4
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
8 6 0 2 10 8 1 0 2 6 0 0 0 0 0 12
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
101 102 89 87
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
51 94 77 157
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
13 154 118 94
ND1 (size: 975 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 18 (5.56%)
Alanine (Ala, A)
n = 32 (9.88%)
Serine (Ser, S)
n = 23 (7.1%)
Threonine (Thr, T)
n = 22 (6.79%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 21 (6.48%)
Leucine (Leu, L)
n = 64 (19.75%)
Isoleucine (Ile, I)
n = 24 (7.41%)
Methionine (Met, M)
n = 10 (3.09%)
Proline (Pro, P)
n = 23 (7.1%)
Phenylalanine (Phe, F)
n = 20 (6.17%)
Tyrosine (Tyr, Y)
n = 11 (3.4%)
Tryptophan (Trp, W)
n = 8 (2.47%)
Aspartic acid (Asp, D)
n = 4 (1.23%)
Glutamic acid (Glu, E)
n = 10 (3.09%)
Asparagine (Asn, N)
n = 10 (3.09%)
Glutamine (Gln, Q)
n = 7 (2.16%)
Histidine (His, H)
n = 2 (0.62%)
Lysine (Lys, K)
n = 7 (2.16%)
Arginine (Arg, R)
n = 8 (2.47%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
14 10 6 11 16 22 5 8 5 2 7 8 6 0 11 9
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
4 0 0 4 17 10 1 1 10 4 3 4 12 5 2 5
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
7 9 1 2 9 8 0 1 3 3 8 2 2 5 5 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
2 7 3 0 4 7 0 2 1 3 2 0 0 1 0 6
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
85 94 77 69
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
38 96 52 139
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
27 121 107 70
ND2 (size: 1045 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 20 (5.76%)
Alanine (Ala, A)
n = 41 (11.82%)
Serine (Ser, S)
n = 19 (5.48%)
Threonine (Thr, T)
n = 46 (13.26%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 7 (2.02%)
Leucine (Leu, L)
n = 78 (22.48%)
Isoleucine (Ile, I)
n = 21 (6.05%)
Methionine (Met, M)
n = 11 (3.17%)
Proline (Pro, P)
n = 22 (6.34%)
Phenylalanine (Phe, F)
n = 15 (4.32%)
Tyrosine (Tyr, Y)
n = 7 (2.02%)
Tryptophan (Trp, W)
n = 11 (3.17%)
Aspartic acid (Asp, D)
n = 1 (0.29%)
Glutamic acid (Glu, E)
n = 5 (1.44%)
Asparagine (Asn, N)
n = 9 (2.59%)
Glutamine (Gln, Q)
n = 14 (4.03%)
Histidine (His, H)
n = 8 (2.31%)
Lysine (Lys, K)
n = 9 (2.59%)
Arginine (Arg, R)
n = 4 (1.15%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
11 10 7 25 26 12 3 12 12 2 2 4 1 0 4 11
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
4 0 0 6 25 10 0 5 7 7 1 8 7 7 0 7
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
17 21 1 3 10 4 0 0 2 2 5 1 0 4 5 3
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
5 4 1 0 1 9 0 0 1 3 0 0 0 0 0 10
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
74 114 98 62
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
37 126 53 132
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
13 136 119 80
ND3 (size: 1045 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 20 (5.76%)
Alanine (Ala, A)
n = 41 (11.82%)
Serine (Ser, S)
n = 19 (5.48%)
Threonine (Thr, T)
n = 46 (13.26%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 7 (2.02%)
Leucine (Leu, L)
n = 78 (22.48%)
Isoleucine (Ile, I)
n = 21 (6.05%)
Methionine (Met, M)
n = 11 (3.17%)
Proline (Pro, P)
n = 22 (6.34%)
Phenylalanine (Phe, F)
n = 15 (4.32%)
Tyrosine (Tyr, Y)
n = 7 (2.02%)
Tryptophan (Trp, W)
n = 11 (3.17%)
Aspartic acid (Asp, D)
n = 1 (0.29%)
Glutamic acid (Glu, E)
n = 5 (1.44%)
Asparagine (Asn, N)
n = 9 (2.59%)
Glutamine (Gln, Q)
n = 14 (4.03%)
Histidine (His, H)
n = 8 (2.31%)
Lysine (Lys, K)
n = 9 (2.59%)
Arginine (Arg, R)
n = 4 (1.15%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
11 10 7 25 26 12 3 12 12 2 2 4 1 0 4 11
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
4 0 0 6 25 10 0 5 7 7 1 8 7 7 0 7
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
17 21 1 3 10 4 0 0 2 2 5 1 0 4 5 3
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
5 4 1 0 1 9 0 0 1 3 0 0 0 0 0 10
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
74 114 98 62
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
37 126 53 132
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
13 136 119 80
ND4 (size: 1381 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 27 (5.88%)
Alanine (Ala, A)
n = 44 (9.59%)
Serine (Ser, S)
n = 33 (7.19%)
Threonine (Thr, T)
n = 34 (7.41%)
Cysteine (Cys, C)
n = 4 (0.87%)
Valine (Val, V)
n = 15 (3.27%)
Leucine (Leu, L)
n = 98 (21.35%)
Isoleucine (Ile, I)
n = 42 (9.15%)
Methionine (Met, M)
n = 21 (4.58%)
Proline (Pro, P)
n = 26 (5.66%)
Phenylalanine (Phe, F)
n = 16 (3.49%)
Tyrosine (Tyr, Y)
n = 13 (2.83%)
Tryptophan (Trp, W)
n = 17 (3.7%)
Aspartic acid (Asp, D)
n = 3 (0.65%)
Glutamic acid (Glu, E)
n = 13 (2.83%)
Asparagine (Asn, N)
n = 11 (2.4%)
Glutamine (Gln, Q)
n = 12 (2.61%)
Histidine (His, H)
n = 10 (2.18%)
Lysine (Lys, K)
n = 9 (1.96%)
Arginine (Arg, R)
n = 12 (2.61%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
21 21 15 26 26 28 8 9 9 3 2 8 4 1 10 6
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
6 1 3 10 17 16 1 2 14 6 5 6 18 2 0 7
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
14 9 4 5 8 9 1 2 8 2 11 2 1 2 9 2
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
8 8 5 0 3 7 2 2 4 6 0 0 0 0 0 15
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
102 148 127 83
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
70 127 71 192
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
39 178 143 100
ND4L (size: 297 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 6 (6.12%)
Alanine (Ala, A)
n = 16 (16.33%)
Serine (Ser, S)
n = 9 (9.18%)
Threonine (Thr, T)
n = 5 (5.1%)
Cysteine (Cys, C)
n = 3 (3.06%)
Valine (Val, V)
n = 1 (1.02%)
Leucine (Leu, L)
n = 24 (24.49%)
Isoleucine (Ile, I)
n = 5 (5.1%)
Methionine (Met, M)
n = 3 (3.06%)
Proline (Pro, P)
n = 2 (2.04%)
Phenylalanine (Phe, F)
n = 7 (7.14%)
Tyrosine (Tyr, Y)
n = 0 (0%)
Tryptophan (Trp, W)
n = 1 (1.02%)
Aspartic acid (Asp, D)
n = 1 (1.02%)
Glutamic acid (Glu, E)
n = 2 (2.04%)
Asparagine (Asn, N)
n = 4 (4.08%)
Glutamine (Gln, Q)
n = 2 (2.04%)
Histidine (His, H)
n = 3 (3.06%)
Lysine (Lys, K)
n = 1 (1.02%)
Arginine (Arg, R)
n = 3 (3.06%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
2 3 1 3 7 7 3 4 2 0 1 0 0 0 2 5
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 1 2 7 4 5 0 1 5 0 0 0 0 2 0 2
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
3 0 0 1 4 3 1 0 0 0 0 0 0 1 3 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
3 1 1 1 0 1 0 0 2 1 0 0 0 1 0 1
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
26 30 18 25
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
13 32 14 40
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
7 41 29 22
ND5 (size: 1848 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 28 (4.55%)
Alanine (Ala, A)
n = 59 (9.59%)
Serine (Ser, S)
n = 46 (7.48%)
Threonine (Thr, T)
n = 50 (8.13%)
Cysteine (Cys, C)
n = 6 (0.98%)
Valine (Val, V)
n = 30 (4.88%)
Leucine (Leu, L)
n = 106 (17.24%)
Isoleucine (Ile, I)
n = 52 (8.46%)
Methionine (Met, M)
n = 22 (3.58%)
Proline (Pro, P)
n = 31 (5.04%)
Phenylalanine (Phe, F)
n = 41 (6.67%)
Tyrosine (Tyr, Y)
n = 10 (1.63%)
Tryptophan (Trp, W)
n = 13 (2.11%)
Aspartic acid (Asp, D)
n = 17 (2.76%)
Glutamic acid (Glu, E)
n = 11 (1.79%)
Asparagine (Asn, N)
n = 27 (4.39%)
Glutamine (Gln, Q)
n = 17 (2.76%)
Histidine (His, H)
n = 14 (2.28%)
Lysine (Lys, K)
n = 20 (3.25%)
Arginine (Arg, R)
n = 15 (2.44%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
19 33 16 15 34 33 11 10 15 2 11 9 5 5 12 29
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
6 2 4 12 26 21 0 4 16 4 4 8 20 3 0 15
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
23 11 1 6 19 9 1 1 10 1 9 2 3 5 22 2
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
12 10 1 7 10 18 2 1 7 7 0 0 0 1 0 11
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
145 170 182 119
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
73 175 117 251
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
38 283 174 121
ND6 (size: 522 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 28 (16.18%)
Alanine (Ala, A)
n = 20 (11.56%)
Serine (Ser, S)
n = 11 (6.36%)
Threonine (Thr, T)
n = 8 (4.62%)
Cysteine (Cys, C)
n = 1 (0.58%)
Valine (Val, V)
n = 22 (12.72%)
Leucine (Leu, L)
n = 30 (17.34%)
Isoleucine (Ile, I)
n = 5 (2.89%)
Methionine (Met, M)
n = 7 (4.05%)
Proline (Pro, P)
n = 5 (2.89%)
Phenylalanine (Phe, F)
n = 7 (4.05%)
Tyrosine (Tyr, Y)
n = 8 (4.62%)
Tryptophan (Trp, W)
n = 4 (2.31%)
Aspartic acid (Asp, D)
n = 1 (0.58%)
Glutamic acid (Glu, E)
n = 8 (4.62%)
Asparagine (Asn, N)
n = 2 (1.16%)
Glutamine (Gln, Q)
n = 1 (0.58%)
Histidine (His, H)
n = 0 (0%)
Lysine (Lys, K)
n = 0 (0%)
Arginine (Arg, R)
n = 5 (2.89%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
4 1 4 6 1 1 3 11 1 0 8 1 7 6 6 1
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
3 1 0 12 0 6 2 3 2 4 19 2 1 2 0 6
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
0 1 1 3 0 1 3 3 1 5 3 4 8 1 1 0
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
0 2 6 1 0 0 0 1 0 2 2 0 0 0 1 0
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
79 22 26 47
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
42 40 21 71
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
58 12 42 62
Total protein-coding genes (size: 11478 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 244 (6.38%)
Alanine (Ala, A)
n = 360 (9.42%)
Serine (Ser, S)
n = 246 (6.43%)
Threonine (Thr, T)
n = 289 (7.56%)
Cysteine (Cys, C)
n = 25 (0.65%)
Valine (Val, V)
n = 228 (5.96%)
Leucine (Leu, L)
n = 677 (17.71%)
Isoleucine (Ile, I)
n = 277 (7.25%)
Methionine (Met, M)
n = 139 (3.64%)
Proline (Pro, P)
n = 220 (5.75%)
Phenylalanine (Phe, F)
n = 235 (6.15%)
Tyrosine (Tyr, Y)
n = 111 (2.9%)
Tryptophan (Trp, W)
n = 117 (3.06%)
Aspartic acid (Asp, D)
n = 77 (2.01%)
Glutamic acid (Glu, E)
n = 102 (2.67%)
Asparagine (Asn, N)
n = 115 (3.01%)
Glutamine (Gln, Q)
n = 96 (2.51%)
Histidine (His, H)
n = 102 (2.67%)
Lysine (Lys, K)
n = 76 (1.99%)
Arginine (Arg, R)
n = 81 (2.12%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
124 153 84 142 187 186 53 90 78 18 64 65 72 27 97 138
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
55 8 17 78 147 123 12 36 103 62 43 62 99 55 4 66
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
111 97 15 46 86 56 6 11 41 34 77 16 19 38 77 20
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
82 82 20 26 51 70 6 12 23 40 6 0 0 6 1 101
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
1011 1067 948 798
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
519 1063 686 1556
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
301 1457 1202 864 

Error: F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ ?​t​e​r​m​=​(​"​C​h​e​l​o​n​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ l​a​b​r​o​s​u​s​"​[​O​r​g​a​n​i​s​m​]​)​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ A​N​D​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ (​r​e​f​s​e​q​[​f​i​l​t​e​r​]​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ A​N​D​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ m​i​t​o​c​h​o​n​d​r​i​o​n​[​f​i​l​t​e​r​]​)​
Contact: Vadim E. Fraifeld, MD, PhD

Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel

Email:
How to cite us:

If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.