Viewing data for Heloderma suspectum


Scientific name Heloderma suspectum
Common name Gila monster
Maximum lifespan 28.90 years (Heloderma suspectum@AnAge)

Total mtDNA (size: 16846 bases) GC AT G C A T
Base content (bases) 6232 10614 4076 2156 5032 5582
Base content per 1 kb (bases) 370 630 242 128 299 331
Base content (%) 37.0% 63.0%
Total protein-coding genes (size: 11337 bases) GC AT G C A T
Base content (bases) 4158 7179 2825 1333 3499 3680
Base content per 1 kb (bases) 367 633 249 118 309 325
Base content (%) 36.7% 63.3%
D-loop: No data available for this section.
Total tRNA-coding genes (size: 1508 bases) GC AT G C A T
Base content (bases) 519 989 308 211 447 542
Base content per 1 kb (bases) 344 656 204 140 296 359
Base content (%) 34.4% 65.6%
Total rRNA-coding genes (size: 2481 bases) GC AT G C A T
Base content (bases) 938 1543 528 410 619 924
Base content per 1 kb (bases) 378 622 213 165 249 372
Base content (%) 37.8% 62.2%
12S rRNA gene (size: 942 bases) GC AT G C A T
Base content (bases) 357 585 199 158 238 347
Base content per 1 kb (bases) 379 621 211 168 253 368
Base content (%) 37.9% 62.1%
16S rRNA gene (size: 1539 bases) GC AT G C A T
Base content (bases) 581 958 329 252 381 577
Base content per 1 kb (bases) 378 622 214 164 248 375
Base content (%) 37.8% 62.2%

ATP6 (size: 683 bases) GC AT G C A T
Base content (bases) 225 458 158 67 220 238
Base content per 1 kb (bases) 329 671 231 98 322 348
Base content (%) 32.9% 67.1%
ATP8 (size: 165 bases) GC AT G C A T
Base content (bases) 47 118 36 11 62 56
Base content per 1 kb (bases) 285 715 218 67 376 339
Base content (%) 28.5% 71.5%
COX1 (size: 1548 bases) GC AT G C A T
Base content (bases) 602 946 348 254 511 435
Base content per 1 kb (bases) 389 611 225 164 330 281
Base content (%) 38.9% 61.1%
COX2 (size: 688 bases) GC AT G C A T
Base content (bases) 259 429 168 91 200 229
Base content per 1 kb (bases) 376 624 244 132 291 333
Base content (%) 37.6% 62.4%
COX3 (size: 784 bases) GC AT G C A T
Base content (bases) 307 477 192 115 243 234
Base content per 1 kb (bases) 392 608 245 147 310 298
Base content (%) 39.2% 60.8%
CYTB (size: 1136 bases) GC AT G C A T
Base content (bases) 429 707 301 128 370 337
Base content per 1 kb (bases) 378 622 265 113 326 297
Base content (%) 37.8% 62.2%
ND1 (size: 968 bases) GC AT G C A T
Base content (bases) 353 615 242 111 294 321
Base content per 1 kb (bases) 365 635 250 115 304 332
Base content (%) 36.5% 63.5%
ND2 (size: 1038 bases) GC AT G C A T
Base content (bases) 379 659 268 111 296 363
Base content per 1 kb (bases) 365 635 258 107 285 350
Base content (%) 36.5% 63.5%
ND3 (size: 346 bases) GC AT G C A T
Base content (bases) 133 213 80 53 119 94
Base content per 1 kb (bases) 384 616 231 153 344 272
Base content (%) 38.4% 61.6%
ND4 (size: 1378 bases) GC AT G C A T
Base content (bases) 475 903 346 129 461 442
Base content per 1 kb (bases) 345 655 251 94 335 321
Base content (%) 34.5% 65.5%
ND4L (size: 297 bases) GC AT G C A T
Base content (bases) 113 184 81 32 91 93
Base content per 1 kb (bases) 380 620 273 108 306 313
Base content (%) 38.0% 62.0%
ND5 (size: 1824 bases) GC AT G C A T
Base content (bases) 667 1157 482 185 552 605
Base content per 1 kb (bases) 366 634 264 101 303 332
Base content (%) 36.6% 63.4%
ND6 (size: 525 bases) GC AT G C A T
Base content (bases) 183 342 131 52 91 251
Base content per 1 kb (bases) 349 651 250 99 173 478
Base content (%) 34.9% 65.1%

ATP6 (size: 683 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 10 (4.42%)
Alanine (Ala, A)
n = 12 (5.31%)
Serine (Ser, S)
n = 15 (6.64%)
Threonine (Thr, T)
n = 27 (11.95%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 8 (3.54%)
Leucine (Leu, L)
n = 52 (23.01%)
Isoleucine (Ile, I)
n = 18 (7.96%)
Methionine (Met, M)
n = 19 (8.41%)
Proline (Pro, P)
n = 11 (4.87%)
Phenylalanine (Phe, F)
n = 11 (4.87%)
Tyrosine (Tyr, Y)
n = 7 (3.1%)
Tryptophan (Trp, W)
n = 3 (1.33%)
Aspartic acid (Asp, D)
n = 1 (0.44%)
Glutamic acid (Glu, E)
n = 4 (1.77%)
Asparagine (Asn, N)
n = 8 (3.54%)
Glutamine (Gln, Q)
n = 10 (4.42%)
Histidine (His, H)
n = 2 (0.88%)
Lysine (Lys, K)
n = 4 (1.77%)
Arginine (Arg, R)
n = 5 (2.21%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
16 2 16 13 4 24 1 10 10 0 3 2 3 0 10 1
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
3 0 0 2 3 7 0 1 1 7 1 1 1 8 1 12
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
1 14 0 1 1 7 0 2 4 3 4 1 0 5 3 2
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
0 3 1 0 1 4 0 0 1 4 0 0 0 0 0 2
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
35 70 82 40
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
24 59 36 108
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
8 29 119 71
ATP8 (size: 165 bases)
Amino acid sequence: MPQLNPSPWFYILMSAWISLFTLVFTKILCISHNNPMTLNTYKYKSDPWIWPWH*
Amino acid frequencies:
Glycine (Gly, G)
n = 0 (0%)
Alanine (Ala, A)
n = 1 (1.85%)
Serine (Ser, S)
n = 5 (9.26%)
Threonine (Thr, T)
n = 4 (7.41%)
Cysteine (Cys, C)
n = 1 (1.85%)
Valine (Val, V)
n = 1 (1.85%)
Leucine (Leu, L)
n = 6 (11.11%)
Isoleucine (Ile, I)
n = 5 (9.26%)
Methionine (Met, M)
n = 3 (5.56%)
Proline (Pro, P)
n = 6 (11.11%)
Phenylalanine (Phe, F)
n = 3 (5.56%)
Tyrosine (Tyr, Y)
n = 3 (5.56%)
Tryptophan (Trp, W)
n = 5 (9.26%)
Aspartic acid (Asp, D)
n = 1 (1.85%)
Glutamic acid (Glu, E)
n = 0 (0%)
Asparagine (Asn, N)
n = 4 (7.41%)
Glutamine (Gln, Q)
n = 1 (1.85%)
Histidine (His, H)
n = 2 (3.7%)
Lysine (Lys, K)
n = 3 (5.56%)
Arginine (Arg, R)
n = 0 (0%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
4 1 2 2 1 2 0 1 1 0 1 0 0 0 3 0
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
1 1 0 0 1 0 0 0 0 0 0 1 0 5 0 1
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
1 2 0 4 0 1 0 0 0 3 0 0 0 2 2 2
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
0 0 0 1 0 3 0 0 0 0 0 0 0 0 1 5
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
3 14 19 19
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
6 16 15 18
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
2 6 22 25
COX1 (size: 1548 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 48 (9.32%)
Alanine (Ala, A)
n = 38 (7.38%)
Serine (Ser, S)
n = 31 (6.02%)
Threonine (Thr, T)
n = 40 (7.77%)
Cysteine (Cys, C)
n = 2 (0.39%)
Valine (Val, V)
n = 36 (6.99%)
Leucine (Leu, L)
n = 61 (11.84%)
Isoleucine (Ile, I)
n = 40 (7.77%)
Methionine (Met, M)
n = 31 (6.02%)
Proline (Pro, P)
n = 27 (5.24%)
Phenylalanine (Phe, F)
n = 39 (7.57%)
Tyrosine (Tyr, Y)
n = 19 (3.69%)
Tryptophan (Trp, W)
n = 17 (3.3%)
Aspartic acid (Asp, D)
n = 15 (2.91%)
Glutamic acid (Glu, E)
n = 11 (2.14%)
Asparagine (Asn, N)
n = 15 (2.91%)
Glutamine (Gln, Q)
n = 9 (1.75%)
Histidine (His, H)
n = 20 (3.88%)
Lysine (Lys, K)
n = 8 (1.55%)
Arginine (Arg, R)
n = 8 (1.55%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
31 9 25 20 7 16 4 13 9 0 12 10 13 1 32 7
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
6 1 1 6 6 24 2 9 17 19 3 6 3 14 4 18
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
7 15 0 8 4 13 2 2 2 9 10 1 1 10 5 10
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
10 10 1 12 3 8 0 0 4 4 0 0 1 0 0 16
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
148 111 139 118
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
80 132 97 207
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
26 105 199 186
COX2 (size: 688 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 8 (3.51%)
Alanine (Ala, A)
n = 12 (5.26%)
Serine (Ser, S)
n = 17 (7.46%)
Threonine (Thr, T)
n = 19 (8.33%)
Cysteine (Cys, C)
n = 2 (0.88%)
Valine (Val, V)
n = 10 (4.39%)
Leucine (Leu, L)
n = 26 (11.4%)
Isoleucine (Ile, I)
n = 26 (11.4%)
Methionine (Met, M)
n = 15 (6.58%)
Proline (Pro, P)
n = 12 (5.26%)
Phenylalanine (Phe, F)
n = 10 (4.39%)
Tyrosine (Tyr, Y)
n = 10 (4.39%)
Tryptophan (Trp, W)
n = 5 (2.19%)
Aspartic acid (Asp, D)
n = 11 (4.82%)
Glutamic acid (Glu, E)
n = 11 (4.82%)
Asparagine (Asn, N)
n = 8 (3.51%)
Glutamine (Gln, Q)
n = 8 (3.51%)
Histidine (His, H)
n = 8 (3.51%)
Lysine (Lys, K)
n = 5 (2.19%)
Arginine (Arg, R)
n = 6 (2.63%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
14 12 10 8 5 6 1 5 8 0 6 1 2 1 6 4
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
5 1 1 1 2 9 0 2 2 4 0 2 1 9 0 2
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
4 12 1 1 5 6 2 1 2 5 5 0 1 5 3 5
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
3 9 2 6 5 3 2 0 2 4 0 0 0 0 0 5
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
52 54 76 47
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
24 57 61 87
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
15 57 92 65
COX3 (size: 784 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 19 (7.31%)
Alanine (Ala, A)
n = 17 (6.54%)
Serine (Ser, S)
n = 16 (6.15%)
Threonine (Thr, T)
n = 28 (10.77%)
Cysteine (Cys, C)
n = 2 (0.77%)
Valine (Val, V)
n = 11 (4.23%)
Leucine (Leu, L)
n = 39 (15.0%)
Isoleucine (Ile, I)
n = 17 (6.54%)
Methionine (Met, M)
n = 12 (4.62%)
Proline (Pro, P)
n = 10 (3.85%)
Phenylalanine (Phe, F)
n = 20 (7.69%)
Tyrosine (Tyr, Y)
n = 11 (4.23%)
Tryptophan (Trp, W)
n = 12 (4.62%)
Aspartic acid (Asp, D)
n = 4 (1.54%)
Glutamic acid (Glu, E)
n = 9 (3.46%)
Asparagine (Asn, N)
n = 4 (1.54%)
Glutamine (Gln, Q)
n = 7 (2.69%)
Histidine (His, H)
n = 15 (5.77%)
Lysine (Lys, K)
n = 3 (1.15%)
Arginine (Arg, R)
n = 5 (1.92%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
12 5 10 15 0 9 2 11 5 2 3 3 4 1 10 10
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
2 1 1 4 6 7 0 2 7 10 0 0 1 9 0 7
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
9 11 1 2 0 9 0 4 1 4 7 0 2 2 2 5
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
10 7 2 3 1 3 0 0 0 5 0 0 0 0 0 12
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
60 63 69 69
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
43 66 53 99
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
12 63 112 74
CYTB (size: 1136 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 23 (6.1%)
Alanine (Ala, A)
n = 21 (5.57%)
Serine (Ser, S)
n = 30 (7.96%)
Threonine (Thr, T)
n = 22 (5.84%)
Cysteine (Cys, C)
n = 3 (0.8%)
Valine (Val, V)
n = 11 (2.92%)
Leucine (Leu, L)
n = 67 (17.77%)
Isoleucine (Ile, I)
n = 40 (10.61%)
Methionine (Met, M)
n = 15 (3.98%)
Proline (Pro, P)
n = 24 (6.37%)
Phenylalanine (Phe, F)
n = 25 (6.63%)
Tyrosine (Tyr, Y)
n = 16 (4.24%)
Tryptophan (Trp, W)
n = 12 (3.18%)
Aspartic acid (Asp, D)
n = 7 (1.86%)
Glutamic acid (Glu, E)
n = 6 (1.59%)
Asparagine (Asn, N)
n = 19 (5.04%)
Glutamine (Gln, Q)
n = 9 (2.39%)
Histidine (His, H)
n = 12 (3.18%)
Lysine (Lys, K)
n = 10 (2.65%)
Arginine (Arg, R)
n = 6 (1.59%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
24 16 14 17 11 22 1 14 7 2 3 4 3 1 13 12
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
1 0 3 6 4 11 0 1 6 12 4 3 5 15 1 7
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
5 10 0 9 6 15 0 0 0 9 7 1 2 8 11 3
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
9 5 1 5 2 8 2 1 1 4 0 0 0 0 0 11
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
68 102 106 102
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
44 97 79 158
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
16 102 151 109
ND1 (size: 968 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 15 (4.67%)
Alanine (Ala, A)
n = 20 (6.23%)
Serine (Ser, S)
n = 24 (7.48%)
Threonine (Thr, T)
n = 23 (7.17%)
Cysteine (Cys, C)
n = 2 (0.62%)
Valine (Val, V)
n = 13 (4.05%)
Leucine (Leu, L)
n = 58 (18.07%)
Isoleucine (Ile, I)
n = 31 (9.66%)
Methionine (Met, M)
n = 23 (7.17%)
Proline (Pro, P)
n = 23 (7.17%)
Phenylalanine (Phe, F)
n = 16 (4.98%)
Tyrosine (Tyr, Y)
n = 12 (3.74%)
Tryptophan (Trp, W)
n = 9 (2.8%)
Aspartic acid (Asp, D)
n = 4 (1.25%)
Glutamic acid (Glu, E)
n = 10 (3.12%)
Asparagine (Asn, N)
n = 12 (3.74%)
Glutamine (Gln, Q)
n = 8 (2.49%)
Histidine (His, H)
n = 2 (0.62%)
Lysine (Lys, K)
n = 9 (2.8%)
Arginine (Arg, R)
n = 8 (2.49%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
21 10 20 12 7 23 0 14 8 0 2 1 9 1 9 7
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
3 1 1 1 8 8 3 1 7 5 2 1 4 17 1 3
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
4 16 0 8 4 10 0 1 1 3 9 0 2 7 5 1
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
1 10 0 4 0 9 0 0 2 5 1 0 0 0 0 9
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
62 83 100 77
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
36 88 57 141
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
13 71 163 75
ND2 (size: 1038 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 17 (4.93%)
Alanine (Ala, A)
n = 29 (8.41%)
Serine (Ser, S)
n = 22 (6.38%)
Threonine (Thr, T)
n = 41 (11.88%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 8 (2.32%)
Leucine (Leu, L)
n = 63 (18.26%)
Isoleucine (Ile, I)
n = 36 (10.43%)
Methionine (Met, M)
n = 29 (8.41%)
Proline (Pro, P)
n = 17 (4.93%)
Phenylalanine (Phe, F)
n = 15 (4.35%)
Tyrosine (Tyr, Y)
n = 5 (1.45%)
Tryptophan (Trp, W)
n = 9 (2.61%)
Aspartic acid (Asp, D)
n = 3 (0.87%)
Glutamic acid (Glu, E)
n = 4 (1.16%)
Asparagine (Asn, N)
n = 13 (3.77%)
Glutamine (Gln, Q)
n = 12 (3.48%)
Histidine (His, H)
n = 6 (1.74%)
Lysine (Lys, K)
n = 12 (3.48%)
Arginine (Arg, R)
n = 4 (1.16%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
26 10 25 15 6 24 3 15 10 2 3 2 3 0 7 8
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
4 0 0 6 9 14 0 2 4 10 1 3 4 9 1 6
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
9 23 3 2 5 11 0 2 2 3 2 2 0 5 8 1
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
5 4 0 1 2 12 0 0 0 4 0 0 0 1 0 7
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
61 87 135 63
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
34 105 56 151
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
16 76 172 82
ND3 (size: 1038 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 17 (4.93%)
Alanine (Ala, A)
n = 29 (8.41%)
Serine (Ser, S)
n = 22 (6.38%)
Threonine (Thr, T)
n = 41 (11.88%)
Cysteine (Cys, C)
n = 0 (0%)
Valine (Val, V)
n = 8 (2.32%)
Leucine (Leu, L)
n = 63 (18.26%)
Isoleucine (Ile, I)
n = 36 (10.43%)
Methionine (Met, M)
n = 29 (8.41%)
Proline (Pro, P)
n = 17 (4.93%)
Phenylalanine (Phe, F)
n = 15 (4.35%)
Tyrosine (Tyr, Y)
n = 5 (1.45%)
Tryptophan (Trp, W)
n = 9 (2.61%)
Aspartic acid (Asp, D)
n = 3 (0.87%)
Glutamic acid (Glu, E)
n = 4 (1.16%)
Asparagine (Asn, N)
n = 13 (3.77%)
Glutamine (Gln, Q)
n = 12 (3.48%)
Histidine (His, H)
n = 6 (1.74%)
Lysine (Lys, K)
n = 12 (3.48%)
Arginine (Arg, R)
n = 4 (1.16%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
26 10 25 15 6 24 3 15 10 2 3 2 3 0 7 8
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
4 0 0 6 9 14 0 2 4 10 1 3 4 9 1 6
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
9 23 3 2 5 11 0 2 2 3 2 2 0 5 8 1
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
5 4 0 1 2 12 0 0 0 4 0 0 0 1 0 7
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
61 87 135 63
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
34 105 56 151
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
16 76 172 82
ND4 (size: 1378 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 17 (3.71%)
Alanine (Ala, A)
n = 28 (6.11%)
Serine (Ser, S)
n = 37 (8.08%)
Threonine (Thr, T)
n = 34 (7.42%)
Cysteine (Cys, C)
n = 6 (1.31%)
Valine (Val, V)
n = 8 (1.75%)
Leucine (Leu, L)
n = 94 (20.52%)
Isoleucine (Ile, I)
n = 41 (8.95%)
Methionine (Met, M)
n = 40 (8.73%)
Proline (Pro, P)
n = 27 (5.9%)
Phenylalanine (Phe, F)
n = 24 (5.24%)
Tyrosine (Tyr, Y)
n = 17 (3.71%)
Tryptophan (Trp, W)
n = 10 (2.18%)
Aspartic acid (Asp, D)
n = 3 (0.66%)
Glutamic acid (Glu, E)
n = 10 (2.18%)
Asparagine (Asn, N)
n = 17 (3.71%)
Glutamine (Gln, Q)
n = 14 (3.06%)
Histidine (His, H)
n = 12 (2.62%)
Lysine (Lys, K)
n = 12 (2.62%)
Arginine (Arg, R)
n = 8 (1.75%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
33 8 37 30 6 36 2 17 13 1 4 0 4 0 17 7
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
3 3 3 5 14 9 0 4 4 8 1 4 5 17 1 12
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
6 15 1 9 7 12 0 3 6 7 10 0 3 8 9 7
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
5 9 1 1 2 12 0 1 2 5 0 0 0 0 0 10
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
66 135 153 105
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
50 117 85 207
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
13 94 204 148
ND4L (size: 297 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 5 (5.1%)
Alanine (Ala, A)
n = 6 (6.12%)
Serine (Ser, S)
n = 11 (11.22%)
Threonine (Thr, T)
n = 10 (10.2%)
Cysteine (Cys, C)
n = 4 (4.08%)
Valine (Val, V)
n = 2 (2.04%)
Leucine (Leu, L)
n = 22 (22.45%)
Isoleucine (Ile, I)
n = 8 (8.16%)
Methionine (Met, M)
n = 10 (10.2%)
Proline (Pro, P)
n = 1 (1.02%)
Phenylalanine (Phe, F)
n = 3 (3.06%)
Tyrosine (Tyr, Y)
n = 1 (1.02%)
Tryptophan (Trp, W)
n = 0 (0%)
Aspartic acid (Asp, D)
n = 1 (1.02%)
Glutamic acid (Glu, E)
n = 2 (2.04%)
Asparagine (Asn, N)
n = 3 (3.06%)
Glutamine (Gln, Q)
n = 2 (2.04%)
Histidine (His, H)
n = 5 (5.1%)
Lysine (Lys, K)
n = 0 (0%)
Arginine (Arg, R)
n = 2 (2.04%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
4 4 9 5 2 8 1 6 2 0 1 0 1 0 2 1
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
1 1 3 1 1 4 0 2 0 3 0 0 0 1 0 1
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
8 1 0 1 3 4 0 0 3 0 1 0 0 2 1 2
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
3 2 0 1 0 0 0 0 0 2 0 0 0 1 0 0
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
16 26 34 23
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
14 25 15 45
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
2 30 44 23
ND5 (size: 1824 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 27 (4.45%)
Alanine (Ala, A)
n = 42 (6.92%)
Serine (Ser, S)
n = 48 (7.91%)
Threonine (Thr, T)
n = 53 (8.73%)
Cysteine (Cys, C)
n = 5 (0.82%)
Valine (Val, V)
n = 8 (1.32%)
Leucine (Leu, L)
n = 100 (16.47%)
Isoleucine (Ile, I)
n = 66 (10.87%)
Methionine (Met, M)
n = 45 (7.41%)
Proline (Pro, P)
n = 26 (4.28%)
Phenylalanine (Phe, F)
n = 36 (5.93%)
Tyrosine (Tyr, Y)
n = 13 (2.14%)
Tryptophan (Trp, W)
n = 11 (1.81%)
Aspartic acid (Asp, D)
n = 9 (1.48%)
Glutamic acid (Glu, E)
n = 13 (2.14%)
Asparagine (Asn, N)
n = 36 (5.93%)
Glutamine (Gln, Q)
n = 26 (4.28%)
Histidine (His, H)
n = 14 (2.31%)
Lysine (Lys, K)
n = 22 (3.62%)
Arginine (Arg, R)
n = 7 (1.15%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
45 21 42 20 19 38 3 17 23 3 3 0 3 2 20 16
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
3 1 4 14 15 12 1 6 10 9 2 4 6 16 0 12
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
22 18 1 9 10 19 1 2 7 6 7 3 3 20 16 5
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
9 13 0 4 5 19 3 1 2 3 1 0 0 0 1 8
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
99 153 231 125
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
59 160 134 255
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
27 169 240 172
ND6 (size: 525 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 22 (12.64%)
Alanine (Ala, A)
n = 11 (6.32%)
Serine (Ser, S)
n = 16 (9.2%)
Threonine (Thr, T)
n = 6 (3.45%)
Cysteine (Cys, C)
n = 3 (1.72%)
Valine (Val, V)
n = 26 (14.94%)
Leucine (Leu, L)
n = 36 (20.69%)
Isoleucine (Ile, I)
n = 9 (5.17%)
Methionine (Met, M)
n = 3 (1.72%)
Proline (Pro, P)
n = 4 (2.3%)
Phenylalanine (Phe, F)
n = 11 (6.32%)
Tyrosine (Tyr, Y)
n = 9 (5.17%)
Tryptophan (Trp, W)
n = 4 (2.3%)
Aspartic acid (Asp, D)
n = 2 (1.15%)
Glutamic acid (Glu, E)
n = 3 (1.72%)
Asparagine (Asn, N)
n = 3 (1.72%)
Glutamine (Gln, Q)
n = 0 (0%)
Histidine (His, H)
n = 1 (0.57%)
Lysine (Lys, K)
n = 1 (0.57%)
Arginine (Arg, R)
n = 4 (2.3%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
9 0 2 4 0 1 2 21 0 0 14 0 6 6 11 0
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
1 3 0 7 1 2 1 14 0 3 5 2 0 1 1 4
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
1 1 0 8 0 2 2 4 0 9 0 2 8 3 0 1
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
0 2 1 1 1 1 0 3 0 0 1 0 0 1 0 2
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
64 16 26 69
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
37 33 20 85
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
30 3 45 97
Total protein-coding genes (size: 11380 bases)
Amino acid sequence:
Amino acid frequencies:
Glycine (Gly, G)
n = 216 (5.7%)
Alanine (Ala, A)
n = 243 (6.41%)
Serine (Ser, S)
n = 277 (7.31%)
Threonine (Thr, T)
n = 316 (8.34%)
Cysteine (Cys, C)
n = 31 (0.82%)
Valine (Val, V)
n = 145 (3.83%)
Leucine (Leu, L)
n = 651 (17.18%)
Isoleucine (Ile, I)
n = 347 (9.16%)
Methionine (Met, M)
n = 249 (6.57%)
Proline (Pro, P)
n = 197 (5.2%)
Phenylalanine (Phe, F)
n = 223 (5.89%)
Tyrosine (Tyr, Y)
n = 126 (3.33%)
Tryptophan (Trp, W)
n = 102 (2.69%)
Aspartic acid (Asp, D)
n = 64 (1.69%)
Glutamic acid (Glu, E)
n = 90 (2.38%)
Asparagine (Asn, N)
n = 144 (3.8%)
Glutamine (Gln, Q)
n = 109 (2.88%)
Histidine (His, H)
n = 99 (2.61%)
Lysine (Lys, K)
n = 90 (2.38%)
Arginine (Arg, R)
n = 65 (1.72%)
Codon statistics:
AUU AUC AUA CUU CUC CUA CUG UUA CAA CAG GUU GUC GUA GUG UUU UUC
244 103 215 168 72 213 21 154 98 11 55 24 52 14 146 77
AUG UGU UGC GCU GCC GCA GCG GGU GGC GGA GGG CCU CCC CCA CCG ACU
34 13 18 55 70 111 7 44 58 94 20 29 30 127 11 88
ACC ACA ACG UCU UCC UCA UCG AGU AGC UAU UAC UGG UUG AAU AAC CAU
79 140 9 64 45 110 7 22 29 63 63 11 23 77 67 44
CAC GAA GAG GAU GAC AAA AAG CGU CGC CGA CGG AGA AGG UAA UAG UGA
55 77 13 40 24 83 7 6 14 42 3 0 1 3 2 91
Codons with 1st base G Codons with 1st base C Codons with 1st base A Codons with 1st base U
758 944 1198 890
Codons with 2nd base G Codons with 2nd base C Codons with 2nd base A Codons with 2nd base U
466 982 727 1615
Codons with 3rd base G Codons with 3rd base C Codons with 3rd base A Codons with 3rd base U
194 828 1610 1158 

Error: F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ ?​t​e​r​m​=​(​"​H​e​l​o​d​e​r​m​a​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ s​u​s​p​e​c​t​u​m​"​[​O​r​g​a​n​i​s​m​]​)​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ A​N​D​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ (​r​e​f​s​e​q​[​f​i​l​t​e​r​]​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ A​N​D​
F​a​i​l​e​d​ t​o​ u​n​d​e​r​s​t​a​n​d​ i​d​:​ m​i​t​o​c​h​o​n​d​r​i​o​n​[​f​i​l​t​e​r​]​)​
Contact: Vadim E. Fraifeld, MD, PhD

Head: Lab for the Biology of Aging, The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev
P.O. Box 653, Beer-Sheva 8410501, Israel

Email:
How to cite us:

If you would like to cite this database please use:
Toren D, Barzilay T, Tacutu R, Lehmann G, Muradian KK, Fraifeld VE. MitoAge: a database for comparative analysis of mitochondrial DNA, with a special focus on animal longevity. Nucleic Acids Res. 2016; 44(D1):D1262-5.